Skip to content

perf: autobump bio/vep/cache #2959

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
merged 2 commits into from
May 24, 2024
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
28 changes: 14 additions & 14 deletions bio/vep/cache/environment.linux-64.pin.txt
Original file line number Diff line number Diff line change
Expand Up @@ -9,15 +9,15 @@ https://conda.anaconda.org/conda-forge/noarch/kernel-headers_linux-64-2.6.32-he0
https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.39-hcc3a1bd_1.conda#737be0d34c22d24432049ab7a3214de4
https://conda.anaconda.org/conda-forge/linux-64/libgcc-devel_linux-64-10.4.0-hd38fd1e_19.tar.bz2#b41d6540a78ba2518655eebcb0e41e20
https://conda.anaconda.org/conda-forge/linux-64/libgfortran-3.0.0-1.tar.bz2#d7c7e92a8ccc518709474dd3eda896b9
https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-13.2.0-h7e041cc_5.conda#f6f6600d18a4047b54f803cf708b868a
https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-13.2.0-hc0a3c3a_7.conda#53ebd4c833fa01cb2c6353e99f905406
https://conda.anaconda.org/conda-forge/noarch/tzdata-2024a-h0c530f3_0.conda#161081fc7cec0bfda0d86d7cb595f8d8
https://conda.anaconda.org/conda-forge/linux-64/libgomp-13.2.0-h807b86a_5.conda#d211c42b9ce49aee3734fdc828731689
https://conda.anaconda.org/conda-forge/linux-64/libgomp-13.2.0-h77fa898_7.conda#abf3fec87c2563697defa759dec3d639
https://conda.anaconda.org/conda-forge/noarch/sysroot_linux-64-2.12-he073ed8_17.conda#595db67e32b276298ff3d94d07d47fbf
https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2#73aaf86a425cc6e73fcf236a5a46396d
https://conda.anaconda.org/conda-forge/linux-64/binutils_impl_linux-64-2.39-he00db2b_1.conda#3d726e8b51a1f5bfd66892a2b7d9db2d
https://conda.anaconda.org/conda-forge/linux-64/binutils_linux-64-2.39-h5fc0e48_13.conda#7f25a524665e4e2f8a5f86522f8d0e31
https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-13.2.0-h807b86a_5.conda#d4ff227c46917d3b4565302a2bbb276b
https://conda.anaconda.org/conda-forge/linux-64/argtable2-2.13-h14c3975_1001.tar.bz2#b9e0ac5d747ceab0c8b85a470358e1a6
https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-13.2.0-h77fa898_7.conda#72ec1b1b04c4d15d4204ece1ecea5978
https://conda.anaconda.org/conda-forge/linux-64/argtable2-2.13-hd590300_1004.conda#d7d089e975b1213c2a0f94e592b7b422
https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-hd590300_5.conda#69b8b6202a07720f448be700e300ccf4
https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.28.1-hd590300_0.conda#dcde58ff9a1f30b0037a2315d1846d1f
https://conda.anaconda.org/bioconda/linux-64/clustalw-2.1-h4ac6f70_10.tar.bz2#e7756d46d67ea32f90b684f6770f290d
Expand All @@ -39,15 +39,15 @@ https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.38.1-h0b41bf4_0.conda#
https://conda.anaconda.org/conda-forge/linux-64/libxcrypt-4.4.36-hd590300_1.conda#5aa797f8787fe7a17d1b0821485b5adc
https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.2.13-hd590300_5.conda#f36c115f1ee199da648e0597ec2047ad
https://conda.anaconda.org/bioconda/linux-64/muscle-5.1-h4ac6f70_3.tar.bz2#aea487cbcbed07625e0963472c4ac568
https://conda.anaconda.org/bioconda/linux-64/ncbi-vdb-3.1.0-h4ac6f70_2.tar.bz2#76066b4a20b930b78a8a39cf5fa7a381
https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.4.20240210-h59595ed_0.conda#97da8860a0da5413c7c98a3b3838a645
https://conda.anaconda.org/conda-forge/linux-64/openssl-3.2.1-hd590300_1.conda#9d731343cff6ee2e5a25c4a091bf8e2a
https://conda.anaconda.org/bioconda/linux-64/ncbi-vdb-3.1.1-h4ac6f70_0.tar.bz2#4cbc542ee7db0710bdf07a4e55f5daaf
https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.5-h59595ed_0.conda#fcea371545eda051b6deafb24889fc69
https://conda.anaconda.org/conda-forge/linux-64/openssl-3.3.0-h4ab18f5_3.conda#12ea6d0d4ed54530eaed18e4835c1f7c
https://conda.anaconda.org/bioconda/linux-64/paml-4.10.7-h031d066_1.tar.bz2#627002991a379d013307808bf9b71676
https://conda.anaconda.org/conda-forge/linux-64/pcre-8.45-h9c3ff4c_0.tar.bz2#c05d1820a6d34ff07aaaab7a9b7eddaa
https://conda.anaconda.org/bioconda/linux-64/poa-2.0-h031d066_5.tar.bz2#7f92f2dd187e08868ffc6a9e12525f75
https://conda.anaconda.org/conda-forge/linux-64/unzip-6.0-h7f98852_3.tar.bz2#7cb7109505433a5abbf68bb34b31edac
https://conda.anaconda.org/conda-forge/linux-64/xz-5.2.6-h166bdaf_0.tar.bz2#2161070d867d1b1204ea749c8eec4ef0
https://conda.anaconda.org/bioconda/linux-64/clustalo-1.2.4-hdbdd923_7.tar.bz2#24fd3aaebe5ab116cb8fbddd34d62e39
https://conda.anaconda.org/bioconda/linux-64/clustalo-1.2.4-hdbdd923_8.tar.bz2#9baa8c81d5ca18a5336fe748bfa8e7a9
https://conda.anaconda.org/conda-forge/linux-64/expat-2.6.2-h59595ed_0.conda#53fb86322bdb89496d7579fe3f02fd61
https://conda.anaconda.org/conda-forge/linux-64/gcc_impl_linux-64-10.4.0-h5231bdf_19.tar.bz2#a086547de4cee874e72d5a43230372ec
https://conda.anaconda.org/conda-forge/linux-64/libasprintf-devel-0.22.5-h661eb56_2.conda#02e41ab5834dcdcc8590cf29d9526f50
Expand All @@ -63,7 +63,7 @@ https://conda.anaconda.org/conda-forge/linux-64/readline-8.2-h8228510_1.conda#47
https://conda.anaconda.org/conda-forge/linux-64/tk-8.6.13-noxft_h4845f30_101.conda#d453b98d9c83e71da0741bb0ff4d76bc
https://conda.anaconda.org/bioconda/linux-64/viennarna-2.4.7-py27_2.tar.bz2#7e533112461dea3391f2246460277ea5
https://conda.anaconda.org/conda-forge/linux-64/zlib-1.2.13-hd590300_5.conda#68c34ec6149623be41a1933ab996a209
https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.5-hfc55251_0.conda#04b88013080254850d6c01ed54810589
https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.6-ha6fb4c9_0.conda#4d056880988120e29d75bfff282e0f45
https://conda.anaconda.org/conda-forge/linux-64/gcc_linux-64-10.4.0-h9215b83_13.conda#a38a8d1059689117691fb736215a196a
https://conda.anaconda.org/conda-forge/linux-64/gettext-0.22.5-h59595ed_2.conda#219ba82e95d7614cf7140d2a4afc0926
https://conda.anaconda.org/conda-forge/linux-64/krb5-1.21.2-h659d440_0.conda#cd95826dbd331ed1be26bdf401432844
Expand Down Expand Up @@ -115,7 +115,7 @@ https://conda.anaconda.org/bioconda/noarch/perl-xml-regexp-0.04-pl5321hdfd78af_3
https://conda.anaconda.org/bioconda/noarch/perl-xml-xpathengine-0.14-pl5321hdfd78af_3.tar.bz2#4af616066d02762108e88cf5413d3ded
https://conda.anaconda.org/conda-forge/linux-64/python-3.12.3-hab00c5b_0_cpython.conda#2540b74d304f71d3e89c81209db4db84
https://conda.anaconda.org/conda-forge/linux-64/gawk-5.3.0-ha916aea_0.conda#66ef869337c8061f6a96b0348d138a62
https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.7.1-hca28451_0.conda#755c7f876815003337d2c61ff5d047e5
https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.8.0-hca28451_0.conda#f21c27f076a07907e70c49bb57bd0f20
https://conda.anaconda.org/conda-forge/linux-64/libidn2-2.3.7-hd590300_0.conda#2b7b0d827c6447cc1d85dc06d5b5de46
https://conda.anaconda.org/bioconda/noarch/perl-bioperl-core-1.7.8-pl5321hdfd78af_1.tar.bz2#e627a38fe206468089dc73a0aafb6c8c
https://conda.anaconda.org/conda-forge/noarch/perl-carp-1.50-pl5321hd8ed1ab_0.tar.bz2#bdddc03e28019b902da71b722f2288d7
Expand All @@ -136,11 +136,11 @@ https://conda.anaconda.org/conda-forge/noarch/perl-text-csv-2.02-pl5321hd8ed1ab_
https://conda.anaconda.org/conda-forge/noarch/perl-text-diff-1.45-pl5321hd8ed1ab_0.tar.bz2#7c91b422ca8ccb679449d1e3cdd3b7d7
https://conda.anaconda.org/bioconda/noarch/perl-tree-dag_node-1.32-pl5321hdfd78af_0.tar.bz2#09b05f575f3ae5f4a87003c857e3ad5d
https://conda.anaconda.org/bioconda/noarch/perl-types-serialiser-1.01-pl5321hdfd78af_0.tar.bz2#cfc65753e827bbef80c00eaa395f6ae7
https://conda.anaconda.org/conda-forge/noarch/setuptools-69.5.1-pyhd8ed1ab_0.conda#7462280d81f639363e6e63c81276bd9e
https://conda.anaconda.org/conda-forge/noarch/setuptools-70.0.0-pyhd8ed1ab_0.conda#c8ddb4f34a208df4dd42509a0f6a1c89
https://conda.anaconda.org/conda-forge/noarch/wheel-0.43.0-pyhd8ed1ab_1.conda#0b5293a157c2b5cd513dd1b03d8d3aae
https://conda.anaconda.org/conda-forge/linux-64/curl-8.7.1-hca28451_0.conda#d2dd5466be2ce818f8097847341da63d
https://conda.anaconda.org/conda-forge/linux-64/curl-8.8.0-he654da7_0.conda#042341d8b9ba4ee7f2722b81fae9f0ad
https://conda.anaconda.org/bioconda/linux-64/htslib-1.20-h81da01d_0.tar.bz2#1084947eefd2bbe9c1f84ca24061a9d5
https://conda.anaconda.org/conda-forge/linux-64/mafft-7.525-h56fdecd_0.conda#164fe6657ea34e923fe893d5116f3ad5
https://conda.anaconda.org/conda-forge/linux-64/mafft-7.526-h4ab18f5_0.conda#49583145deca5984ca37c494b06ab7ac
https://conda.anaconda.org/bioconda/linux-64/perl-bio-samtools-1.43-pl5321he4a0461_4.tar.bz2#e766315d6c69e23e74e5917f77d96ab1
https://conda.anaconda.org/bioconda/noarch/perl-bio-searchio-hmmer-1.7.3-pl5321hdfd78af_0.tar.bz2#8251ea4d5dc4fd65272ac6700c1d8a21
https://conda.anaconda.org/conda-forge/noarch/perl-business-isbn-data-20210112.006-pl5321hd8ed1ab_0.tar.bz2#a70f08650ec3919ee5e599834f1349d3
Expand Down Expand Up @@ -184,4 +184,4 @@ https://conda.anaconda.org/bioconda/noarch/perl-xml-dom-xpath-0.14-pl5321hdfd78a
https://conda.anaconda.org/bioconda/noarch/perl-bio-featureio-1.6.905-pl5321hdfd78af_4.tar.bz2#1b4b260b45e9cac33fcb45918cda428b
https://conda.anaconda.org/bioconda/noarch/perl-bioperl-1.7.8-hdfd78af_1.tar.bz2#a693939710e572d0f85f6058b534e319
https://conda.anaconda.org/bioconda/linux-64/perl-bio-db-hts-3.01-pl5321h6141fd1_8.tar.bz2#9bd60dd669288d8b6fbcc06dd6c8f3e5
https://conda.anaconda.org/bioconda/noarch/ensembl-vep-111.0-pl5321h2a3209d_0.tar.bz2#18a2cedc60ea453a12006ca10aac9a61
https://conda.anaconda.org/bioconda/noarch/ensembl-vep-112.0-pl5321h2a3209d_0.tar.bz2#483c04201882a9ba1b18ddb505ea284b
2 changes: 1 addition & 1 deletion bio/vep/cache/environment.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ channels:
- nodefaults
dependencies:
- python =3.12.3
- ensembl-vep =111.0
- ensembl-vep =112.0
Loading