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512 Open 1,738 Closed
512 Open 1,738 Closed
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Issues list

new module: purecn/presegmented new module Adding a new module
#8270 opened Apr 11, 2025 by lbeltrame
4 tasks done
@lbeltrame
update module: purecn/* update module
#8264 opened Apr 10, 2025 by lbeltrame
4 tasks done
1
@lbeltrame
Remove custom docker.runOptions from nextflow.configs living in tests folders bug Something isn't working
#8252 opened Apr 9, 2025 by famosab
[FEATURE] update cellranger modules containers to v9 update module
#8244 opened Apr 8, 2025 by fmalmeida
@fmalmeida
2
[BATCH] Module updates that do not require pipeline updates
#8239 opened Apr 8, 2025 by famosab
[BATCH] Module updates requiring pipeline updates
#8238 opened Apr 8, 2025 by famosab
[FEATURE] nf-test assertions - use md5 sums for readLines nf-test
#8236 opened Apr 8, 2025 by famosab
46 tasks
new module: picard/genotypeconcordance new module Adding a new module
#8225 opened Apr 7, 2025 by kjellinjonas
3 of 4 tasks
@kjellinjonas
new module: pbtk/bam2fasta new module Adding a new module
#8222 opened Apr 7, 2025 by Shubhamverma-bioinfo
4 tasks done
new module: Yleaf new module Adding a new module
#8211 opened Apr 4, 2025 by trianglegrrl
3 of 4 tasks
1
@trianglegrrl
Update biocontainers/ont-modkit Docker tag to v0.4.1
#8197 opened Apr 2, 2025 by jkh00
[FEATURE] Use nft-vcf in the freebayes tests
#8195 opened Apr 2, 2025 by maxulysse
new module: varify new module Adding a new module
#8169 opened Mar 31, 2025 by Lupphes
3 of 4 tasks
new module: fastplong new module Adding a new module
#8168 opened Mar 31, 2025 by Lupphes
4 tasks done
@Lupphes
1
new module: pyclonevi new module Adding a new module
#8165 opened Mar 31, 2025 by giorgiagandolfi
4 tasks done
@giorgiagandolfi
GFASTATS fails when genome size positional argument is given bug Something isn't working
#8164 opened Mar 31, 2025 by mahesh-panchal
2 tasks done
MLST Unit Tests Fail bug Something isn't working
#8152 opened Mar 27, 2025 by acvander
2 tasks done
new module: ARACNe3 new module Adding a new module
#8142 opened Mar 26, 2025 by stikos
4 tasks done
1
@stikos
new module: VIPER new module Adding a new module
#8136 opened Mar 26, 2025 by ddomenico
3 of 4 tasks
1
@ddomenico
nf-core lint fails with eigenv variable name bug Something isn't working
#8113 opened Mar 26, 2025 by bruno-ariano
2 tasks done
new module: deconwolf new module Adding a new module
#8109 opened Mar 26, 2025 by felixS27
4 tasks done
update module: rsem/calculateexpression and rsem/preparereference update module
#8108 opened Mar 26, 2025 by delagoya
4 tasks done
1
1
new module: integron_finder new module Adding a new module
#8094 opened Mar 26, 2025 by nguyent-son
4 tasks done
@nguyent-son
new module: seqtk/comp new module Adding a new module
#8091 opened Mar 26, 2025 by sainsachiko
4 tasks done
@sainsachiko
Migrate the accession_metadata.nf module new module Adding a new module
#8089 opened Mar 26, 2025 by Dishalodha
3 of 4 tasks
@shradhaebi
2
ProTip! Updated in the last three days: updated:>2025-04-10.