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testing new htsjdk and picard
Build and Test GATK 4 #5454: Pull request #9200 opened by lbergelson
June 5, 2025 16:17 7m 19s lb_test_htsjdk
June 5, 2025 16:17 7m 19s
PR #9200
CodeQL #1400: by lbergelson
June 5, 2025 16:17 In progress refs/pull/9200/head
June 5, 2025 16:17 In progress
Vs 1619
Build and Test GATK 4 #5453: Pull request #9196 synchronize by koncheto-broad
June 5, 2025 14:10 46m 0s VS-1619
June 5, 2025 14:10 46m 0s
Vs 1619
Build and Test GATK 4 #5452: Pull request #9196 synchronize by koncheto-broad
June 5, 2025 14:04 46m 21s VS-1619
June 5, 2025 14:04 46m 21s
Vs 1619
Build and Test GATK 4 #5451: Pull request #9196 synchronize by koncheto-broad
June 5, 2025 13:36 44m 55s VS-1619
June 5, 2025 13:36 44m 55s
Push on ah_var_store
CodeQL #1399: by gbggrant
June 5, 2025 11:18 7m 57s ah_var_store
June 5, 2025 11:18 7m 57s
Build and Upload GATK Nightly Docker Image
Build and Upload GATK Nightly Docker Image #1157: Scheduled
June 5, 2025 05:25 11m 41s master
June 5, 2025 05:25 11m 41s
PR #9199
CodeQL #1398: by gbggrant
June 4, 2025 18:49 7m 43s refs/pull/9199/head
June 4, 2025 18:49 7m 43s
Scheduled
CodeQL #1397: by github-advanced-security bot
June 4, 2025 18:30 8m 6s master
June 4, 2025 18:30 8m 6s
GenotypeGVCFs can't handle somatic GVCFs from DRAGEN 3.8.4
carrot-test-run-from-pr-comment #5568: Issue comment #7840 (comment) created by ldgauthier
June 4, 2025 14:55 3s
June 4, 2025 14:55 3s
Build and Upload GATK Nightly Docker Image
Build and Upload GATK Nightly Docker Image #1156: Scheduled
June 4, 2025 05:24 11m 49s master
June 4, 2025 05:24 11m 49s
DDO-4137 update to read artifacts from GAR
Build and Test GATK 4 #5449: Pull request #9198 opened by ungwudik
June 3, 2025 16:37 44m 51s un-ddo-4137
June 3, 2025 16:37 44m 51s
PR #9198
CodeQL #1396: by ungwudik
June 3, 2025 16:37 7m 54s refs/pull/9198/head
June 3, 2025 16:37 7m 54s
Prep for 0.6.3 release [VS-1670]
Build and Test GATK 4 #5448: Pull request #9194 synchronize by mcovarr
June 3, 2025 15:13 45m 6s vs_1670_release_0_6_3
June 3, 2025 15:13 45m 6s
PR #9194
CodeQL #1395: by mcovarr
June 3, 2025 15:13 7m 42s refs/pull/9194/head
June 3, 2025 15:13 7m 42s
Prep for 0.6.3 release [VS-1670]
Build and Test GATK 4 #5447: Pull request #9194 synchronize by mcovarr
June 3, 2025 15:10 45m 33s vs_1670_release_0_6_3
June 3, 2025 15:10 45m 33s
PR #9194
CodeQL #1394: by mcovarr
June 3, 2025 15:10 7m 57s refs/pull/9194/head
June 3, 2025 15:10 7m 57s
Push on ah_var_store
CodeQL #1393: by mcovarr
June 3, 2025 13:49 7m 30s ah_var_store
June 3, 2025 13:49 7m 30s
Specify --max-rows explicitly to not truncate to 100 [VS-1664]
Build and Test GATK 4 #5446: Pull request #9197 opened by mcovarr
June 3, 2025 13:46 47m 5s vs_1664_fix_max_rows
June 3, 2025 13:46 47m 5s
PR #9197
CodeQL #1392: by mcovarr
June 3, 2025 13:46 7m 48s refs/pull/9197/head
June 3, 2025 13:46 7m 48s
GenotypeGVCFs can't handle somatic GVCFs from DRAGEN 3.8.4
carrot-test-run-from-pr-comment #5567: Issue comment #7840 (comment) created by MartaRusmini
June 3, 2025 13:29 2s
June 3, 2025 13:29 2s
Build and Upload GATK Nightly Docker Image
Build and Upload GATK Nightly Docker Image #1155: Scheduled
June 3, 2025 05:25 11m 35s master
June 3, 2025 05:25 11m 35s
Bundle support for FeatureInputs, references; add CreateBundle tool.
Build and Test GATK 4 #5445: Pull request #8944 synchronize by cmnbroad
June 2, 2025 19:26 43m 59s cn_vcf_bundles
June 2, 2025 19:26 43m 59s
PR #8944
CodeQL #1391: by cmnbroad
June 2, 2025 19:26 7m 28s refs/pull/8944/head
June 2, 2025 19:26 7m 28s