Empty dataMatrix with all data in variableMetadata

[yguitton]

Hi,

A "small" bug in the wrapper seems responsible for the following issue, dataMatrix is only filled with variableNames.
I think that make.names is responsible for that, or maybe the file extension .mzML

@jsaintvanne, any idea?
Yann

[jsaintvanne]

Hi,

Possible to have the history ? Or to access to where it could bug ?
Because it was good before and we didn't touch anything...

[yguitton]

Hi The trouble cames with file extensions still behing present in colnames Yann Le mer. 22 juil. 2020 10:15, Julien Saint-Vanne <notifications@github.com> a écrit :

…

Hi, Possible to have the history ? Or to access to where it could bug ? Because it was good before and we didn't touch anything... — You are receiving this because you were assigned. Reply to this email directly, view it on GitHub <#49 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABI76KKF77A3FQT7U36CLRDR42NZPANCNFSM4PENYCWA> .

[jsaintvanne]

is it resolve ? is it because of an other tool ?

[yguitton]

Hello, not really... It is mainly due to the tools keeping files extension in sampleMetadata. Maybe time to change the way runGC wrapper is creating the three files outputs. Yann Le mer. 19 août 2020 08:32, Julien Saint-Vanne <notifications@github.com> a écrit :

…

is it resolve ? is it because of an other tool ? — You are receiving this because you were assigned. Reply to this email directly, view it on GitHub <#49 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABI76KJNYD7UNFFT5CNSOVDSBNWZFANCNFSM4PENYCWA> .