Open
Description
Hi, I was using ngs.plot.r with this command:
ngs.plot.r -G hg19 -R tss -C my.bam -O test
But I got an error:
Using database: /***:)***/database/hg19/hg19.ensembl.genebody.protein_coding.RData
Done
Loading R li
Done
Loading R libraries.....Done
Analyze bam files and calculate coverage..................................Done
N1 20242
N2 698
Error in dimnames(x) <- dn :
length of 'dimnames' [1] not equal to array extent
Calls: rownames<- -> rownames<-
Execution halted
I believe the error is at this line:
rownames(enrichList[[i]]) <- paste(coord.list[[reg]]$gname,
coord.list[[reg]]$tid, sep=':')
It may because of my low coverage bam data. But I am not sure how to handle it, could you help me to figure this out?
Thank you very much!
Metadata
Metadata
Assignees
Labels
No labels