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samtools / htsjdk Public

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feat: Add sanity check to indexed FASTA file#1745

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yfarjoun wants to merge 5 commits intomastersamtools/htsjdk:masterfrom

yf/feat/check_fasta_against_indexsamtools/htsjdk:yf/feat/check_fasta_against_indexCopy head branch name to clipboard

Conversation Commits5 (5)Checks Files changed

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Commits on May 9, 2025

add sanity check to indexed fasta. The last position in the fasta file (according ot the index) must be close to the size of the fasta file itself. A mismatch could indicate a corrupt fasta file, o…
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Commits on May 15, 2025

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