Bug in result

[TH1052638958]

Describe the bug
I was computing the interaction between a molecule and a protein with website of PLIP,I input the pdb file containing the docking conformation of the molecule and the protein,the result I got is odd：the molecule was distorted or truncated
result:

molecule:

To Reproduce
the input pdb file:
7L1G_chainA_protein_AAmol_0_iter_2_smina_out.zip

Please tell me how can I deal with this problem.Thank you

[Nitayah]

I'm have the same issue with another molecule!

[mestia]

Thank you for the report. However, it would be very useful if you provided more information about the issue.

[snbolz]

The numbering in your PDB file is incompatible with PLIP processing. Specifically, the TER line does not maintain sequential numbering, causing a shift in PLIP’s internal numbering. With the corrected numbering (see attached file), PLIP analysis runs smoothly.

7L1G_chainA_protein_AAmol_0_iter_2_smina_out_fixed.pdb.zip