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    • DESeq2

      Public
      Differential expression of RNA-seq data using the Negative Binomial
      R
      9540310Updated Jul 25, 2025Jul 25, 2025
    • tximport

      Public
      Transcript quantification import for modular pipelines
      R
      3414110Updated Jul 1, 2025Jul 1, 2025
    • tximeta

      Public
      Transcript quantification import with automatic metadata detection
      R
      1168100Updated Jun 25, 2025Jun 25, 2025
    • fishpond

      Public
      Differential expression and allelic analysis, nonparametric statistics
      R
      102910Updated Jan 3, 2025Jan 3, 2025
    • .github

      Public
      0000Updated Nov 23, 2024Nov 23, 2024
    • A space to collect code and docs related to Rust for Bioinformatics
      0400Updated Apr 13, 2024Apr 13, 2024
    • RNA-seq workflow: exploratory analysis and differential expression
      TeX
      407800Updated Nov 14, 2023Nov 14, 2023
    • rnaseqDTU

      Public
      RNA-seq workflow: differential transcript usage
      TeX
      112200Updated Aug 20, 2023Aug 20, 2023
    • mrlocus

      Public
      Mendelian Randomization of gene expression (exposure) on GWAS traits (outcome). See website for software usage guide:
      R
      8110Updated Aug 16, 2023Aug 16, 2023
    • Set up a computer for Computational Biology
      Python
      3500Updated Oct 4, 2022Oct 4, 2022