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[PRE REVIEW]: OpenLPTGUI: A user-friendly GUI for 3D Lagrangian particle tracking #7674

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editorialbot opened this issue Jan 16, 2025 · 11 comments
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Batchfile pre-review Python TeX Track: 3 (PE) Physics and Engineering waitlisted Submissions in the JOSS backlog due to reduced service mode.

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Submitting author: @clockj (Shijie Zhong)
Repository: https://github.com/clockj/OpenLPTGUI
Branch with paper.md (empty if default branch): main
Version: v1.0.0
Editor: Pending
Reviewers: Pending
Managing EiC: Arfon Smith

Status

status

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HTML: <a href="https://joss.theoj.org/papers/ac0a9d5d1a9f83a31590d159c8ce7db3"><img src="https://joss.theoj.org/papers/ac0a9d5d1a9f83a31590d159c8ce7db3/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/ac0a9d5d1a9f83a31590d159c8ce7db3/status.svg)](https://joss.theoj.org/papers/ac0a9d5d1a9f83a31590d159c8ce7db3)

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@editorialbot editorialbot added pre-review Track: 3 (PE) Physics and Engineering labels Jan 16, 2025
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Hello human, I'm @editorialbot, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

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For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

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Software report:

github.com/AlDanial/cloc v 1.98  T=2.05 s (26.3 files/s, 445567.9 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
CSV                              5              0              0         908190
Python                          24           1030            347           4058
TeX                              3            180              4            719
Text                            18              0              0            592
Markdown                         2             29              0             80
DOS Batch                        1              0              0             13
Bourne Shell                     1              0              0              9
-------------------------------------------------------------------------------
SUM:                            54           1239            351         913661
-------------------------------------------------------------------------------

Commit count by author:

    49	clockj

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Paper file info:

📄 Wordcount for paper.md is 832

✅ The paper includes a Statement of need section

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License info:

🟡 License found: GNU General Public License v3.0 (Check here for OSI approval)

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Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- None

🟡 SKIP DOIs

- No DOI given, and none found for title: Universality and intermittency of pair dispersion ...
- No DOI given, and none found for title: Beauty of turbulent convection: a particle trackin...
- No DOI given, and none found for title: Particle Tracking

❌ MISSING DOIs

- 10.1007/s00348-019-2875-2 may be a valid DOI for title: Introducing OpenLPT: new method of removing ghost ...
- 10.1007/978-3-642-83822-4_43 may be a valid DOI for title: Analyzing 3-D turbulent motions in open channel fl...
- 10.1115/1.3243657 may be a valid DOI for title: Three-dimensional particle tracking velocimetry ba...
- 10.1007/s00348-016-2157-1 may be a valid DOI for title: Shake-The-Box: Lagrangian particle tracking at hig...
- 10.21105/joss.04398 may be a valid DOI for title: MyPTV: A Python package for 3D particle tracking
- 10.1038/s41467-022-28092-3 may be a valid DOI for title: Fragmentation in turbulence by small eddies
- 10.1146/annurev-fluid-031822-041721 may be a valid DOI for title: 3D Lagrangian particle tracking in fluid mechanics
- 10.1017/jfm.2021.390 may be a valid DOI for title: Towards a phenomenological model on the deformatio...
- 10.1007/s00348-023-03601-2 may be a valid DOI for title: 3D Lagrangian tracking of polydispersed bubbles at...
- 10.1088/0957-0233/24/2/024008 may be a valid DOI for title: Iterative reconstruction of volumetric particle di...
- 10.1017/jfm.2020.244 may be a valid DOI for title: Lift and drag coefficients of deformable bubbles i...
- 10.1016/j.ijmultiphaseflow.2020.103397 may be a valid DOI for title: Towards a model of bubble breakup in turbulence th...
- 10.1017/jfm.2020.933 may be a valid DOI for title: Simultaneous measurements of deforming Hinze-scale...
- 10.1017/jfm.2020.1121 may be a valid DOI for title: Experimental investigation of the acceleration sta...
- 10.1017/jfm.2021.69 may be a valid DOI for title: The orientational dynamics of deformable finite-si...
- 10.1103/physrevfluids.8.024603 may be a valid DOI for title: Scalings and decay of homogeneous, nearly isotropi...
- 10.1016/j.jcp.2024.113212 may be a valid DOI for title: proPTV: A probability-based particle tracking velo...

❌ INVALID DOIs

- None

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👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

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Five most similar historical JOSS papers:

MyPTV: A Python Package for 3D Particle Tracking
Submitting author: @ronshnapp
Handling editor: @jgostick (Active)
Reviewers: @leahmendelson, @jgostick
Similarity score: 0.7771

SPICY: a Python toolbox for meshless assimilation from image velocimetry using radial basis functions
Submitting author: @mendezVKI
Handling editor: @philipcardiff (Active)
Reviewers: @nolankucd, @MatthewFlamm, @ctdegroot
Similarity score: 0.7492

PIVC: A C/C++ Program for Particle Image Velocimetry Vector Computation
Submitting author: @fibreglass2
Handling editor: @Kevin-Mattheus-Moerman (Active)
Reviewers: @clarka34, @quynhneo
Similarity score: 0.7255

MicroTracker.jl: A Julia package for microbot research
Submitting author: @czimm79
Handling editor: @Kevin-Mattheus-Moerman (Active)
Reviewers: @roflmaostc, @mkitti, @BioTurboNick
Similarity score: 0.7204

flowTorch - a Python library for analysis and reduced-order modeling of fluid flows
Submitting author: @AndreWeiner
Handling editor: @Kevin-Mattheus-Moerman (Active)
Reviewers: @akaptano, @JaroslavHron, @salrm8, @hkjeldsberg
Similarity score: 0.7118

⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.

@arfon
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arfon commented Jan 16, 2025

@clockj - thanks for your submission to JOSS. We're currently managing a large backlog of submissions and the editor most appropriate for your area is already rather busy.

For now, we will need to waitlist this paper and process it as the queue reduces. Thanks for your patience!

@arfon arfon added the waitlisted Submissions in the JOSS backlog due to reduced service mode. label Jan 16, 2025
@clockj
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clockj commented Apr 4, 2025

@clockj - thanks for your submission to JOSS. We're currently managing a large backlog of submissions and the editor most appropriate for your area is already rather busy.

For now, we will need to waitlist this paper and process it as the queue reduces. Thanks for your patience!

@arfon
Hi Arfon,

I hope you're doing well. I wanted to follow up on the status of my paper submission — it's been over three months since I submitted, and I noticed I'm still on the waitlist. Could you kindly let me know if there are any updates or next steps?

Thanks so much for your time!

@kyleniemeyer
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@clockj sorry for the delay here - actually, upon further review, this software by itself would not be eligible for JOSS review/publication, because GUI/wrappers are outside our scope.

However, the OpenLPT software itself would be in scope for JOSS, and this GUI could be reviewed alongside that (but the main focus would be the underlying software package, not the GUI).

How do you feel about submitting OpenLPT for review instead, assuming it is at the level of maturity (and has all the elements JOSS looks for)?

@kyleniemeyer
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@clockj just checking in here. If I don't hear something back by 30 April, I'll go ahead and withdraw this submission (but you can still submit OpenLPT later).

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