[PRE REVIEW]: SCONE: Open Source Software for Predictive Simulation of Biological Motion

[whedon]

Submitting author: @tgeijten (Thomas Geijtenbeek)
Repository: https://github.com/opensim-org/SCONE
Version: v1.0.0
Editor: @Kevin-Mattheus-Moerman
Reviewers: @modenaxe, @demotu

Author instructions

Thanks for submitting your paper to JOSS @tgeijten. Currently, there isn't an JOSS editor assigned to your paper.

@tgeijten if you have any suggestions for potential reviewers then please mention them here in this thread. In addition, this list of people have already agreed to review for JOSS and may be suitable for this submission.

Editor instructions

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[whedon]

Hello human, I'm @whedon, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

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What happens now?

This submission is currently in a pre-review state which means we are waiting for an editor to be assigned and for them to find some reviewers for your submission. This may take anything between a few hours to a couple of weeks. Thanks for your patience 😸

You can help the editor by looking at this list of potential reviewers to identify individuals who might be able to review your submission (please start at the bottom of the list). Also, feel free to suggest individuals who are not on this list by mentioning their GitHub handles here.

[whedon]

Attempting PDF compilation. Reticulating splines etc...

[whedon]

PDF failed to compile for issue #1394 with the following error:

/app/vendor/ruby-2.4.4/lib/ruby/2.4.0/find.rb:43:in block in find': No such file or directory - tmp/1394 (Errno::ENOENT) from /app/vendor/ruby-2.4.4/lib/ruby/2.4.0/find.rb:43:in collect!'
from /app/vendor/ruby-2.4.4/lib/ruby/2.4.0/find.rb:43:in find' from /app/vendor/bundle/ruby/2.4.0/bundler/gems/whedon-a1723d160bb6/lib/whedon/processor.rb:57:in find_paper_paths'
from /app/vendor/bundle/ruby/2.4.0/bundler/gems/whedon-a1723d160bb6/bin/whedon:50:in prepare' from /app/vendor/bundle/ruby/2.4.0/gems/thor-0.20.3/lib/thor/command.rb:27:in run'
from /app/vendor/bundle/ruby/2.4.0/gems/thor-0.20.3/lib/thor/invocation.rb:126:in invoke_command' from /app/vendor/bundle/ruby/2.4.0/gems/thor-0.20.3/lib/thor.rb:387:in dispatch'
from /app/vendor/bundle/ruby/2.4.0/gems/thor-0.20.3/lib/thor/base.rb:466:in start' from /app/vendor/bundle/ruby/2.4.0/bundler/gems/whedon-a1723d160bb6/bin/whedon:116:in <top (required)>'
from /app/vendor/bundle/ruby/2.4.0/bin/whedon:23:in load' from /app/vendor/bundle/ruby/2.4.0/bin/whedon:23:in

'

[arfon]

👋 @Kevin-Mattheus-Moerman - the submitting author suggested you as the handling editor.

[arfon]

@whedon generate pdf

[whedon]

Attempting PDF compilation. Reticulating splines etc...

[whedon]

👉 Check article proof 📄 👈

[tgeijten]

Thanks! The bullets points (*) don't show up correctly. Are they supported?

[arfon]

The Markdown parser is a little fussy and needs there to be whitespace before the first bullet. This PR should fix the rendering: opensim-org/SCONE#47

[tgeijten]

Great, thanks! I merged the PR.

[arfon]

@whedon generate pdf

[whedon]

Attempting PDF compilation. Reticulating splines etc...

[whedon]

👉 Check article proof 📄 👈

[danielskatz]

👋 @Kevin-Mattheus-Moerman - ping... the submitting author suggested you as the handling editor.

[Kevin-Mattheus-Moerman]

@whedon assign @Kevin-Mattheus-Moerman as editor

[whedon]

OK, the editor is @Kevin-Mattheus-Moerman

[Kevin-Mattheus-Moerman]

@modenaxe @chrisdembia @moorepants @trallard @demotu @nicoguaro would you be interested in reviewing this work for JOSS?

[nicoguaro]

@Kevin-Mattheus-Moerman, currently I am reviewing another work for JOSS. So, I will decline this one.

[demotu]

yes, I can review it @demotu <https://github.com/demotu> - Marcos Duarte http://demotu.org/

…

On Mon, Apr 22, 2019 at 10:54 AM Kevin Mattheus Moerman < ***@***.***> wrote: @modenaxe <https://github.com/modenaxe> @chrisdembia <https://github.com/chrisdembia> @moorepants <https://github.com/moorepants> @trallard <https://github.com/trallard> @demotu <https://github.com/demotu> @nicoguaro <https://github.com/nicoguaro> would you be interested in reviewing this work for JOSS? — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#1394 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AAY6XHJNW4EYI5CXKO7PDB3PRW7QPANCNFSM4HHEVPKA> .

[moorepants]

I am not currently available to review.

[trallard]

I am sorry @Kevin-Mattheus-Moerman but I have some other reviews down the line that I really need to get going so I am going to pass on this one

[modenaxe]

I can review it. Also, I have tried the alpha version of SCONE few months ago - just disclosing this in case it constitutes a problem -.

[Kevin-Mattheus-Moerman]

@whedon assign @modenaxe as reviewer

[whedon]

OK, the reviewer is @modenaxe

[Kevin-Mattheus-Moerman]

@whedon add @demotu as reviewer

[whedon]

OK, @demotu is now a reviewer

[Kevin-Mattheus-Moerman]

@tgeijten let me know if you'd like to recommend any reviewers

[tgeijten]

Friedl de Groote, Seungmoon Song. Perhaps @chrisdembia knows anyone else?

[tgeijten]

@Kevin-Mattheus-Moerman how many reviewers are needed?

[kyleniemeyer]

@tgeijten Generally JOSS likes to have at least two reviewers, though we can also have one if the editor serves as a second reviewer.

[Kevin-Mattheus-Moerman]

@tgeijten I usually aim for at least 2, which we already have, but I wanted to give you the chance to add some recommended reviewers. To avoid further delay we'll start the review process now.

[Kevin-Mattheus-Moerman]

@whedon start review

[whedon]

OK, I've started the review over in #1421. Feel free to close this issue now!