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Save DRAMP in common database dir #275

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Merged
merged 2 commits into from
May 12, 2023
Merged

Save DRAMP in common database dir #275

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1af35bd
Save DRAMP download in common database dir
jasmezz May 12, 2023
4f901c5
Add DRAMP directory in docs [skip ci]
jasmezz May 12, 2023
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -8,6 +8,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
### `Added`

- [#270](https://github.com/nf-core/funcscan/pull/270) Merged pipeline template of nf-core/tools version 2.8 and updated modules accordingly. (by @jasmezz, @jfy133)
- [#275](https://github.com/nf-core/funcscan/pull/275) Save DRAMP database in the common database directory if `--save_databases` is supplied. (by @jasmezz)

### `Fixed`

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9 changes: 9 additions & 0 deletions conf/modules.config
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Expand Up @@ -496,4 +496,13 @@ process {
saveAs: { filename -> filename.equals('versions.yml') ? null : filename }
]
}

withName: DRAMP_DOWNLOAD {
publishDir = [
path: { "${params.outdir}/databases/dramp" },
mode: params.publish_dir_mode,
enabled: params.save_databases,
saveAs: { filename -> filename.equals('versions.yml') ? null : filename }
]
}
}