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Deactivate AMPlify in full test config #263

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Merged
merged 2 commits into from
Apr 25, 2023
Merged

Deactivate AMPlify in full test config #263

merged 2 commits into from
Apr 25, 2023

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jasmezz
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@jasmezz jasmezz commented Apr 25, 2023

Let's skip resource-hungry AMPlify in the full test in order to save time/costs/polar bears.

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs- [ ] If necessary, also make a PR on the nf-core/funcscan branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

@jasmezz jasmezz requested a review from a team April 25, 2023 12:18
@jasmezz jasmezz added this to the 1.1 - British Beans on Toast milestone Apr 25, 2023
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github-actions bot commented Apr 25, 2023

nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit 5a9cb8b

+| ✅ 157 tests passed       |+
!| ❗   1 tests had warnings |!

❗ Test warnings:

  • pipeline_todos - TODO string in methods_description_template.yml: #Update the HTML below to your prefered methods description, e.g. add publication citation for this pipeline

✅ Tests passed:

Run details

  • nf-core/tools version 2.7.2
  • Run at 2023-04-25 12:34:41

@jasmezz jasmezz merged commit 7b018f0 into dev Apr 25, 2023
@jasmezz jasmezz deleted the fulltest-skip-amplify branch April 25, 2023 13:37
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2 participants