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Added functions to support IO for Parquet files. #562
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Added test_parquet_io.py.
Fixed minor issue.
Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## main #562 +/- ##
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Coverage 100.00% 100.00%
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Files 28 28
Lines 1571 1641 +70
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+ Hits 1571 1641 +70 ☔ View full report in Codecov by Sentry. 🚀 New features to boost your workflow:
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Closes #307
Description
What is this PR
Summary
This PR adds Parquet file support to the
movement
package, enabling it to read and write pose tracking data in the tidy DataFrame format used by the[animovement](https://github.com/roaldarbol/animovement)
R package. It enhances interoperability, supports efficient data storage, and simplifies integration with modern data analysis tools.🧩 Related Issue
#307
✨ What's New
✅ Load Functions (
movement/io/load_poses.py
)from_tidy_df
: Converts a tidy pandas DataFrame into anxarray.Dataset
.from_animovement_file
: Reads a.parquet
file and converts it usingfrom_tidy_df
.from_file
to supportsource_software="animovement"
.✅ Save Functions (
movement/io/save_poses.py
)to_tidy_df
: Converts anxarray.Dataset
to a tidy DataFrame with optional confidence values.to_animovement_file
: Saves a dataset to a.parquet
file viato_tidy_df
.✅ Dependency Update
pyarrow
topyproject.toml
to support Parquet I/O via pandas.✅ Tests (
tests/test_parquet_io.py
)💡 Why This Matters
animovement
package.movement
closer to data science best practices.How has this PR been tested?
Local pytest and CI tests.
Is this a breaking change?
If this PR breaks any existing functionality, please explain how and why.
Does this PR require an update to the documentation?
If any features have changed, or have been added. Please explain how the
documentation has been updated.
Checklist: