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@mite-standard

MITE Data Standard

Governing body for MITE data standard and affiliated repositories

Overview

Welcome to the MITE Standard Organization page!

MITE (Minimum Information about a Tailoring Enzyme) is a community-driven database for the characteriation of tailoring enzymes. These enzymes play important roles in the biosynthesis of secondary or specialized metabolites, naturally occuring molecules with strong biological activities, such as antibiotic properties. MITE summarizes experimental data on the reactions and substrate specificities of these tailoring enzymes in both human- and machine-readable form, using the reaction SMARTS chemical transformation language. THe MITE database can be used as knowledgebase, as parts catalog for synthetic biology, or for machine learning applications.

Interested? Check out our website!

Resources

This page provides documents that regulate collaboration within the MITE project. These guidelines apply to all repositories governed by the MITE Data Standard.

  • 📜Code of Conduct: guidelines for interacting with the project and its contributors
  • 🤝Contributing: outline of modes and terms of contributions to MITE Data Standard repositories.
  • 🏛Governance: description of governance, roles, responsibilities, and attribution
  • 👥Discussion: a discussion board for interaction with the project.
  • 📄Wiki: a Wiki for MITE maintainers and developers.

Repository Content

This community manages several repositories associated to the MITE Data Standard.

Name Description License Zenodo Badge PyPI Badge
mite_schema Data model MIT DOI PyPI version
mite_extras Validation functionality MIT DOI PyPI version
mite_data Data repository CC0 DOI N/A
mite_web Web app MIT DOI N/A

See also the MITE Standard Zenodo Community page.

Dependency graph of repositories

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  1. mite_extras mite_extras Public

    Validation and conversion functionality for reaction SMARTS collected in the scope of MITE

    Python 2 1

  2. mite_data mite_data Public

    Repository containing entries following the MITE data standard

    Python 2

  3. mite_schema mite_schema Public

    A repository containing the MITE JSON schema and auxiliary files

    Python 1

  4. mite_web mite_web Public

    Repository for the MITE web presence

    HTML 1

  5. .github .github Public

    Information on the MITE standard repository

  6. mite_ms mite_ms Public

    Repository for manuscript-related content e.g. Figures

    Python

Repositories

Showing 7 of 7 repositories

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