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data_manager_manual: cast SelectToolParameter to string #2634

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Merged
merged 2 commits into from
Oct 16, 2019

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abretaud
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FOR CONTRIBUTOR:

  • - I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo.
  • - License permits unrestricted use (educational + commercial)
  • - This PR adds a new tool or tool collection
  • - This PR updates an existing tool or tool collection
  • - This PR does something else (explain below)

I found some errors while testing biomaj2galaxy with Galaxy 19.05. So this PR fixes part of the problem: the DM code is getting a galaxy.tools.wrappers.SelectToolParameterWrapper while dict keys are strings

I'm preparing a PR for Galaxy too to fix another part of the problem

…oolParameterWrapper while dict keys are strings)
and add explain why the cast is necessary.
@mvdbeek
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mvdbeek commented Oct 15, 2019

With this fix you should only run into galaxyproject/galaxy#8792 if you create a new data table (which we should fix as well of course)

@mvdbeek mvdbeek merged commit a0d5260 into galaxyproject:master Oct 16, 2019
@mvdbeek mvdbeek changed the title data_manager_manual: fix error with Galaxy>=19.05 data_manager_manual: cast SelectToolParameter to string Oct 16, 2019
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2 participants