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galaxyproject / galaxy Public

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Hierarchical upload API optimized for folders & collections.#5220

Merged

bgruening merged 19 commits intogalaxyproject:devgalaxyproject/galaxy:devfrom

jmchilton:upload_2.0jmchilton/galaxy:upload_2.0Copy head branch name to clipboard

Mar 9, 2018

Conversation Commits19 (19)Checks Files changed

Merged

Hierarchical upload API optimized for folders & collections.#5220
bgruening merged 19 commits intogalaxyproject:devfrom
jmchilton:upload_2.0

Commits

Commits on Mar 8, 2018

Upload simplification - just base this check on link_only.
jmchilton
committed
Refactor shed's CompressedFile abstraction into galaxy.util.compression_util.
jmchilton
committed
Improved doc for library API.
jmchilton
committed
Stronger assertion about link_data_only option in upload.py.
jmchilton
committed
Hierarchical upload API optimized for folders & collections.
jmchilton
committed
Test case for link_to_files during upload.
jmchilton
committed
Do not allow workflows to run tools that are not workflow-compatible.
jmchilton
committed
Don't purge library path pastes and such in upload.py during testing.
jmchilton
committed
Allow uploading individual HDAs via fetch API.
jmchilton
committed
More upload testing, some input is getting deleted that shouldn't.
jmchilton
committed
Handle compressed datatypes appropriately in data fetch API.
jmchilton
committed
Simplify and reduce duplication of upload actions.
jmchilton
committed
Precreate certain outputs for upload 2.0 API.
jmchilton
committed
Avoid symlinks in upload FTP tests.
jmchilton
committed
Cleanup hierarchical upload commit based on PR comments from @bgruening.
jmchilton
committed
Fixes for pre-creating HDAs using data fetch API.
jmchilton
committed
Consistent sniffing regardless of in_place.
jmchilton
committed
More upload tests and fixes.
jmchilton
committed
Fix for data_fetch sniffing.
jmchilton
committed

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