Proposal of new sub-lineage of BA.2.12.1 with additional mutations S:E1202Q, ORF1ab:V4266I mainly in peruvian genomes

[LuisBarcenaF]

Proposal of new sub-lineage of BA.2.12.1 with additional mutations S:E1202Q, ORF1ab:V4266I mainly in peruvian genomes by Group of Genomic Surveillance INS-PERU

Description
Sub-lineage of: Potential new sub-lineage of BA.2.12.1
Earliest sequence: hCoV-19/Peru/LIM-INS-17276/2022 (10/05/2022, Peru)
Most recent sequence: hCoV-19/Peru/LIM-INS-20061/2022 (21/06/2022, Peru)

Countries circulating
Peru (33), England (1)

Some genomes of new sub lineage carried a reversion in Spike:S408R. This potential BA.2.12.1 is principally distributed in Lima, Peru

Genomes
genomes.txt

Evidence
https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_2cf85_c42d00.json?branchLabel=aa%20mutations&c=pango_lineage&label=nuc%20mutations:G13061A&tl=country

[OrsonMM]

[chrisruis]

Thanks @LuisBarcenaF We've added this as BG.6 to start on the branch with G13061A (ORF1a:V4266I)