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JN.1.4.3 (S:T572I) with S:R346T (66-US) #2487

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@FedeGueli

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@FedeGueli

Transferred from Branch 8 of sars-cov-2-variants/lineage-proposals#1097

Original proposal Defining mutations: JN.1.4 > S:t572I (C23277T) Query: C774T,C23277T, -T18453C,-C3177T,-C4327T,-G25445A,-T5389C,-C2980T

Samples: 28

image

Tree:
https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice2_genome_test_403e1_f87880.json?c=userOrOld&label=id:node_6928638
Screenshot 2024-02-04 alle 13 54 59

Important:
This got a sub-lineage with S:R346T (even if it could be an independent one) :
Query: C774T,G22599C, C23277T,-C2980T,C18894T
Samples 6 (US-4 states)
EPI_ISL_18818630, EPI_ISL_18826826, EPI_ISL_18849701,
EPI_ISL_18859307, EPI_ISL_18866094, EPI_ISL_18867924,
Tree:
Screenshot 2024-02-07 alle 09 43 26
https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/singleSubtreeAuspice_genome_test_59c9e_341240.json?label=id:node_6860926

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