XBB.1.5.70 sublineage with ORF3a:T89I and S:S704L (63 seq. mainly Brazil and USA) and a further sublineage with ORF1a:R287G, ORF1a:E633A, and ORF1b:D1130G (19 seq. USA, Canada) #2025

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oobb45729 opened this issue May 28, 2023 · 0 comments

oobb45729 commented May 28, 2023 •

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Substitutions on top of XBB.1.5.70: ORF3a:T89I(C25658T), nuc:C28657T, S:S704L(C23673T)

https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_18722_3a2b30.json?label=id:node_6803652

https://cov-spectrum.org/explore/World/AllSamples/Past6M/variants?variantQuery=ORF1a%3AA4068S%26S%3AL455F%26S%3AF456L%26S%3AS704L&
The subbranch with ORF1a:R287G, ORF1a:E633A, and ORF1b:D1130G is now in 6 different states of USA.
https://open.cov-spectrum.org/explore/United%20States/AllSamples/Past6M/variants?variantQuery=ORF1a%3AR287G%26ORF1a%3AE633A%26ORF1b%3AD1130G&

oobb45729 changed the title ~~XBB.1.5.70 sublineage with ORF3a:T89I and S:S704L (39 seq. mainly Brazil and USA) and a further sublineage with ORF1a:R287G, ORF1a:E633A, and ORF1b:D1130G (14 seq. USA)~~ XBB.1.5.70 sublineage with ORF3a:T89I and S:S704L (63 seq. mainly Brazil and USA) and a further sublineage with ORF1a:R287G, ORF1a:E633A, and ORF1b:D1130G (19 seq. USA, Canada)

corneliusroemer closed this as completed in

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