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1. Virus-Data-Curation Virus-Data-Curation Public

   Suite of tools to screen and curate raw sequences of viral genomes stored in different databases: NCBI Virus, ViPR, ViruSurf and GISAID.

   Python 1

2. Astrocyte-RNAseq-Analysis Astrocyte-RNAseq-Analysis Public

   Rojas-Cruz, A.F., Martín-Jiménez, C.A., González, J. et al. Palmitic Acid Upregulates Type I Interferon–Mediated Antiviral Response and Cholesterol Biosynthesis in Human Astrocytes. Mol Neurobiol (…

   HTML

3. fetch_NGS fetch_NGS Public

   Forked from gibbslab/fetch_NGS

   Pipeline to fetch metadata and raw FastQ files from different databases

   Shell

4. rnaseq-reference rnaseq-reference Public

   Forked from gibbslab/rnaseq-reference

   Pipeline used to analyse RNA sequencing data obtained from organisms with a reference genome and annotation

   Shell

5. bioinfo-tools bioinfo-tools Public

   Forked from jrjhealey/bioinfo-tools

   Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.

   Python

6. RNA-seq_ENCODE RNA-seq_ENCODE Public

   RNA-Seq Pipeline Using ENCODE

   Shell