Fix issue in streaming JDBC database

[akashkulk]

Closes #26986

Partially reverts a change in #20888

The issue here is that :

• If there is a exception caught, the JDBC streaming iterator silently catches the exception and the parent XminStateIterator emits state because the underlying iterator returns false instead of throwing an exception.
• I was not able to reproduce the issue that the comments says : "throwing an exception in tryAdvance() method lead to the endless loop in Spliterator and stream will never close". I've verified that the [onClose](https://github.com/airbytehq/airbyte/blob/master/airbyte-db/db-lib/src/main/java/io/airbyte/db/jdbc/StreamingJdbcDatabase.java#L72)() method does indeed run with this change. So it's not clear if this fix was only tested against a particular DB (Redshift maybe?)

Testing methodology :

1. Create a driver class (similar to what @subodh1810 did in this PR : https://github.com/airbytehq/airbyte/pull/21398/files) with the configs for a sample DB. I used the configs and catalog associated with my test DB, set to xmin replication here :
2. Attach a breakpoint to the start of when the connector begins syncing data.
3. Disconnect the DB
4. Assert that no state is emitted.

I have already built an xmin image 2.0.33-dev.f995e7a36e and updated it on LD based on the following PR :#26723 and verified that it fixes the given issue

[akashkulk]

/test connector=connectors/source-postgres

🕑 connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/5223925793
❌ connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/5223925793
🐛 https://gradle.com/s/3ot2okvv5l3ck

Build Failed

Test summary info:

=========================== short test summary info ============================
FAILED test_core.py::TestConnection::test_check[inputs0] - AssertionError: as...
FAILED test_core.py::TestConnection::test_check[inputs1] - AssertionError: as...
FAILED test_core.py::TestDiscovery::test_discover[inputs0] - docker.errors.Co...
FAILED test_core.py::TestDiscovery::test_discover[inputs1] - docker.errors.Co...
ERROR test_core.py::TestDiscovery::test_defined_cursors_exist_in_schema[inputs0]
ERROR test_core.py::TestDiscovery::test_defined_cursors_exist_in_schema[inputs1]
ERROR test_core.py::TestDiscovery::test_defined_refs_exist_in_schema[inputs0]
ERROR test_core.py::TestDiscovery::test_defined_refs_exist_in_schema[inputs1]
ERROR test_core.py::TestDiscovery::test_defined_keyword_exist_in_schema[inputs0-allOf]
ERROR test_core.py::TestDiscovery::test_defined_keyword_exist_in_schema[inputs0-not]
ERROR test_core.py::TestDiscovery::test_defined_keyword_exist_in_schema[inputs1-allOf]
ERROR test_core.py::TestDiscovery::test_defined_keyword_exist_in_schema[inputs1-not]
ERROR test_core.py::TestDiscovery::test_primary_keys_exist_in_schema[inputs0]
ERROR test_core.py::TestDiscovery::test_primary_keys_exist_in_schema[inputs1]
ERROR test_core.py::TestDiscovery::test_streams_has_sync_modes[inputs0] - doc...
ERROR test_core.py::TestDiscovery::test_streams_has_sync_modes[inputs1] - doc...
ERROR test_core.py::TestDiscovery::test_additional_properties_is_true[inputs0]
ERROR test_core.py::TestDiscovery::test_additional_properties_is_true[inputs1]
ERROR test_core.py::TestDiscovery::test_backward_compatibility[inputs0] - doc...
ERROR test_core.py::TestDiscovery::test_backward_compatibility[inputs1] - doc...
ERROR test_core.py::TestBasicRead::test_read[inputs0] - docker.errors.Contain...
ERROR test_core.py::TestBasicRead::test_read[inputs1] - docker.errors.Contain...
ERROR test_full_refresh.py::TestFullRefresh::test_sequential_reads[inputs0]
ERROR test_full_refresh.py::TestFullRefresh::test_sequential_reads[inputs1]
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/plugin.py:63: Skipping TestIncremental.test_two_sequential_reads: not found in the config.
SKIPPED [2] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/tests/test_core.py:100: The previous and actual specifications are identical.
SKIPPED [2] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/tests/test_core.py:695: This tests currently leads to too much failures. We need to fix the connectors at scale first.
======== 4 failed, 46 passed, 5 skipped, 20 errors in 304.41s (0:05:04) ========

[akashkulk]

/test connector=connectors/source-mysql

🕑 connectors/source-mysql https://github.com/airbytehq/airbyte/actions/runs/5223926794
❌ connectors/source-mysql https://github.com/airbytehq/airbyte/actions/runs/5223926794
🐛 https://gradle.com/s/rkac6uyua7vmc

Build Failed

Test summary info:

Could not find result summary

[akashkulk]

/test connector=connectors/source-mssql

🕑 connectors/source-mssql https://github.com/airbytehq/airbyte/actions/runs/5223927893
✅ connectors/source-mssql https://github.com/airbytehq/airbyte/actions/runs/5223927893
No Python unittests run

Build Passed

Test summary info:

=========================== short test summary info ============================
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/plugin.py:63: Skipping TestConnection.test_check: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/plugin.py:63: Skipping TestDiscovery.test_discover: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/plugin.py:63: Skipping TestBasicRead.test_read: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/plugin.py:63: Skipping TestFullRefresh.test_sequential_reads: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/plugin.py:63: Skipping TestIncremental.test_two_sequential_reads: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/tests/test_core.py:100: The previous and actual specifications are identical.
================= 22 passed, 6 skipped, 30 warnings in 22.11s ==================

[akashkulk]

/test connector=connectors/source-snowflake

🕑 connectors/source-snowflake https://github.com/airbytehq/airbyte/actions/runs/5223928835
❌ connectors/source-snowflake https://github.com/airbytehq/airbyte/actions/runs/5223928835
🐛 https://gradle.com/s/5pkcubfi2npiy

Build Failed

Test summary info:

Could not find result summary

[akashkulk]

/test connector=connectors/source-postgres

🕑 connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/5258608078
❌ connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/5258608078
🐛 https://gradle.com/s/gwdvgjzcsepu6

Build Failed

Test summary info:

=========================== short test summary info ============================
FAILED test_core.py::TestConnection::test_check[inputs0] - AssertionError: as...
FAILED test_core.py::TestConnection::test_check[inputs1] - AssertionError: as...
FAILED test_core.py::TestDiscovery::test_discover[inputs0] - docker.errors.Co...
FAILED test_core.py::TestDiscovery::test_discover[inputs1] - docker.errors.Co...
ERROR test_core.py::TestDiscovery::test_defined_cursors_exist_in_schema[inputs0]
ERROR test_core.py::TestDiscovery::test_defined_cursors_exist_in_schema[inputs1]
ERROR test_core.py::TestDiscovery::test_defined_refs_exist_in_schema[inputs0]
ERROR test_core.py::TestDiscovery::test_defined_refs_exist_in_schema[inputs1]
ERROR test_core.py::TestDiscovery::test_defined_keyword_exist_in_schema[inputs0-allOf]
ERROR test_core.py::TestDiscovery::test_defined_keyword_exist_in_schema[inputs0-not]
ERROR test_core.py::TestDiscovery::test_defined_keyword_exist_in_schema[inputs1-allOf]
ERROR test_core.py::TestDiscovery::test_defined_keyword_exist_in_schema[inputs1-not]
ERROR test_core.py::TestDiscovery::test_primary_keys_exist_in_schema[inputs0]
ERROR test_core.py::TestDiscovery::test_primary_keys_exist_in_schema[inputs1]
ERROR test_core.py::TestDiscovery::test_streams_has_sync_modes[inputs0] - doc...
ERROR test_core.py::TestDiscovery::test_streams_has_sync_modes[inputs1] - doc...
ERROR test_core.py::TestDiscovery::test_additional_properties_is_true[inputs0]
ERROR test_core.py::TestDiscovery::test_additional_properties_is_true[inputs1]
ERROR test_core.py::TestDiscovery::test_backward_compatibility[inputs0] - doc...
ERROR test_core.py::TestDiscovery::test_backward_compatibility[inputs1] - doc...
ERROR test_core.py::TestBasicRead::test_read[inputs0] - docker.errors.Contain...
ERROR test_core.py::TestBasicRead::test_read[inputs1] - docker.errors.Contain...
ERROR test_full_refresh.py::TestFullRefresh::test_sequential_reads[inputs0]
ERROR test_full_refresh.py::TestFullRefresh::test_sequential_reads[inputs1]
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/plugin.py:63: Skipping TestIncremental.test_two_sequential_reads: not found in the config.
SKIPPED [2] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/tests/test_core.py:100: The previous and actual specifications are identical.
SKIPPED [2] ../usr/local/lib/python3.9/site-packages/connector_acceptance_test/tests/test_core.py:695: This tests currently leads to too much failures. We need to fix the connectors at scale first.
======== 4 failed, 46 passed, 5 skipped, 20 errors in 301.73s (0:05:01) ========

[prateekmukhedkar]

The runs that would have succeeded are not going to impact this change.
Hypotheses to mitigate for the risk of releasing the change that reverts a previous fix - watchForOrphanThreads in IntegrationRunner should catch any infinite loops

[octavia-squidington-iii]

destination-redshift test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 1874 seconds

Step	Result
Validate airbyte-integrations/connectors/destination-redshift/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	✅
Build destination-redshift docker image for platform linux/x86_64	✅
Unit tests	✅
Build airbyte/normalization-redshift:dev	✅
Integration tests	✅

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airbyte-ci connectors --name=destination-redshift test

[octavia-squidington-iii]

source-tidb test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 1520 seconds

Step	Result
Validate airbyte-integrations/connectors/source-tidb/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	✅
Build source-tidb docker image for platform linux/x86_64	✅
Unit tests	❌

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airbyte-ci connectors --name=source-tidb test

[octavia-squidington-iii]

destination-oracle test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 6 seconds

Step	Result
Validate airbyte-integrations/connectors/destination-oracle/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	❌

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airbyte-ci connectors --name=destination-oracle test

[octavia-squidington-iii]

destination-teradata test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 7 seconds

Step	Result
Validate airbyte-integrations/connectors/destination-teradata/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	❌

🔗 View the logs here

Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
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airbyte-ci connectors --name=destination-teradata test

[octavia-squidington-iii]

destination-mysql-strict-encrypt test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 4 seconds

Step	Result
Validate airbyte-integrations/connectors/destination-mysql-strict-encrypt/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	❌

🔗 View the logs here

Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
You can run the same pipeline locally on this branch with the airbyte-ci tool with the following command

airbyte-ci connectors --name=destination-mysql-strict-encrypt test

[octavia-squidington-iii]

source-oracle test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 5 seconds

Step	Result
Validate airbyte-integrations/connectors/source-oracle/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	❌

🔗 View the logs here

Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
You can run the same pipeline locally on this branch with the airbyte-ci tool with the following command

airbyte-ci connectors --name=source-oracle test

[octavia-squidington-iii]

destination-clickhouse test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 5 seconds

Step	Result
Validate airbyte-integrations/connectors/destination-clickhouse/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	❌

🔗 View the logs here

Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
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airbyte-ci connectors --name=destination-clickhouse test

[octavia-squidington-iii]

destination-clickhouse-strict-encrypt test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 5 seconds

Step	Result
Validate airbyte-integrations/connectors/destination-clickhouse-strict-encrypt/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	❌

🔗 View the logs here

Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
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airbyte-ci connectors --name=destination-clickhouse-strict-encrypt test

[octavia-squidington-iii]

source-cockroachdb test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 5 seconds

Step	Result
Validate airbyte-integrations/connectors/source-cockroachdb/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	❌

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airbyte-ci connectors --name=source-cockroachdb test

[octavia-squidington-iii]

source-postgres test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 8 seconds

Step	Result
Validate airbyte-integrations/connectors/source-postgres/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	❌

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airbyte-ci connectors --name=source-postgres test

[octavia-squidington-iii]

source-oracle-strict-encrypt test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 4 seconds

Step	Result
Validate airbyte-integrations/connectors/source-oracle-strict-encrypt/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	❌

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airbyte-ci connectors --name=source-oracle-strict-encrypt test

[octavia-squidington-iii]

destination-e2e-test test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 4 seconds

Step	Result
Validate airbyte-integrations/connectors/destination-e2e-test/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	❌

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Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
You can run the same pipeline locally on this branch with the airbyte-ci tool with the following command

airbyte-ci connectors --name=destination-e2e-test test

[octavia-squidington-iii]

source-postgres-strict-encrypt test report (commit 7937029185) - ❌

⏲️ Total pipeline duration: 4 seconds

Step	Result
Validate airbyte-integrations/connectors/source-postgres-strict-encrypt/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	❌

🔗 View the logs here

Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
You can run the same pipeline locally on this branch with the airbyte-ci tool with the following command

airbyte-ci connectors --name=source-postgres-strict-encrypt test

[prateekmukhedkar]

As discussed in team meeting, this change will have no impact on those syncs that would have normally completed.

[github-actions]

Coverage report for source-postgres

There is no coverage information present for the Files changed

Total Project Coverage	65.95%	🍏

[octavia-squidington-iii]

destination-mariadb-columnstore test report (commit 633efb530a) - ❌

⏲️ Total pipeline duration: 5677 seconds

Step	Result
Validate airbyte-integrations/connectors/destination-mariadb-columnstore/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	✅
Build destination-mariadb-columnstore docker image for platform linux/x86_64	✅
Unit tests	✅
Integration tests	❌

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airbyte-ci connectors --name=destination-mariadb-columnstore test

[octavia-squidington-iii]

destination-rockset test report (commit 633efb530a) - ❌

⏲️ Total pipeline duration: 639 seconds

Step	Result
Validate airbyte-integrations/connectors/destination-rockset/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	❌
Build connector tar	✅
Build destination-rockset docker image for platform linux/x86_64	✅
Unit tests	✅
Integration tests	❌

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airbyte-ci connectors --name=destination-rockset test

[octavia-squidington-iii]

destination-pubsub test report (commit 633efb530a) - ❌

⏲️ Total pipeline duration: 1073 seconds

Step	Result
Validate airbyte-integrations/connectors/destination-pubsub/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	✅
Build connector tar	✅
Build destination-pubsub docker image for platform linux/x86_64	✅
Unit tests	✅
Integration tests	✅

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airbyte-ci connectors --name=destination-pubsub test

[github-actions]

Coverage report for source-postgres

There is no coverage information present for the Files changed

Total Project Coverage	65.95%	🍏

[octavia-squidington-iii]

source-postgres-strict-encrypt test report (commit d75b4777b4) - ✅

⏲️ Total pipeline duration: 722 seconds

Step	Result
Validate airbyte-integrations/connectors/source-postgres-strict-encrypt/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	✅
QA checks	✅
Build connector tar	✅
Build source-postgres-strict-encrypt docker image for platform linux/x86_64	✅
Unit tests	✅
Integration tests	✅

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Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
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airbyte-ci connectors --name=source-postgres-strict-encrypt test

[octavia-squidington-iii]

source-tidb test report (commit d75b4777b4) - ❌

⏲️ Total pipeline duration: 1532 seconds

Step	Result
Validate airbyte-integrations/connectors/source-tidb/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	✅
QA checks	✅
Build connector tar	✅
Build source-tidb docker image for platform linux/x86_64	✅
Unit tests	❌

🔗 View the logs here

Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
You can run the same pipeline locally on this branch with the airbyte-ci tool with the following command

airbyte-ci connectors --name=source-tidb test

[github-actions]

Coverage report for source-postgres

File	Coverage [85.87%]	🍏
PostgresSource.java	85.87%	🍏

Total Project Coverage	65.95%	🍏

[akashkulk]

/approve-and-merge reason="Small change, want to isolate from other failing tests"

[octavia-approvington]

Lets merge it

[octavia-squidington-iii]

source-postgres-strict-encrypt test report (commit 3784330e11) - ❌

⏲️ Total pipeline duration: 724 seconds

Step	Result
Validate airbyte-integrations/connectors/source-postgres-strict-encrypt/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	❌
Build connector tar	✅
Build source-postgres-strict-encrypt docker image for platform linux/x86_64	✅
Unit tests	✅
Integration tests	✅

🔗 View the logs here

Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
You can run the same pipeline locally on this branch with the airbyte-ci tool with the following command

airbyte-ci connectors --name=source-postgres-strict-encrypt test

[octavia-squidington-iii]

source-tidb test report (commit 3784330e11) - ❌

⏲️ Total pipeline duration: 1531 seconds

Step	Result
Validate airbyte-integrations/connectors/source-tidb/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	❌
Build connector tar	✅
Build source-tidb docker image for platform linux/x86_64	✅
Unit tests	❌

🔗 View the logs here

Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
You can run the same pipeline locally on this branch with the airbyte-ci tool with the following command

airbyte-ci connectors --name=source-tidb test

[octavia-squidington-iii]

source-oracle test report (commit 3784330e11) - ❌

⏲️ Total pipeline duration: 189 seconds

Step	Result
Validate airbyte-integrations/connectors/source-oracle/metadata.yaml	✅
Connector version semver check.	✅
Connector version increment check.	❌
QA checks	❌
Build connector tar	✅
Build source-oracle docker image for platform linux/x86_64	✅
Unit tests	❌

🔗 View the logs here

Please note that tests are only run on PR ready for review. Please set your PR to draft mode to not flood the CI engine and upstream service on following commits.
You can run the same pipeline locally on this branch with the airbyte-ci tool with the following command

airbyte-ci connectors --name=source-oracle test