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Breaking hearts and minds
🤯
Breaking hearts and minds
445 followers · 3 following

Achievements

Achievement: Pull Sharkx4Achievement: YOLOAchievement: Starstruckx2Achievement: Pair Extraordinairex2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx4Achievement: YOLOAchievement: Starstruckx2Achievement: Pair Extraordinairex2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor

Organizations

@cambiotraining @iSEE @ArtifactDB @BiocPy @crisprVerse @CollaboratorDB @tatami-inc @SingleR-inc @knncolle @gesel-inc

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LTLA/README.md

My typical day

R/Bioconductor contributions

As maintainer

Package BioC-devel BioC-release
csaw
diffHic
InteractionSet
scran
beachmat
cydar
batchelor
BiocNeighbors
BiocSingular
SingleR
simpleSingleCell
chipseqDB
csawUsersGuide
chipseqDBData
basilisk
basilisk.utils
scuttle
celldex
bluster
rebook
scRNAseq
DropletTestFiles
ResidualMatrix
TileDBArray
metapod
mumosa
BumpyMatrix
TrajectoryUtils
dir.expiry
DelayedRandomArray
alabaster.base
alabaster.matrix
alabaster.ranges
alabaster.se
alabaster.sce
alabaster.mae
alabaster.string
alabaster.spatial
alabaster.bumpy
alabaster.vcf
alabaster.files
alabaster
chihaya
screenCounter
gypsum
beachmat.hdf5
assorthead
scrapper
beachmat.tiledb
biocmake
Rigraphlib

As co-maintainer

Package BioC-devel BioC-release
edgeR
scater
SingleCellExperiment
iSEE
iSEEu
TSCAN
DropletUtils

Popular repositories Loading

  1. SingleCellThoughts SingleCellThoughts Public

    Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.

    TeX 44 6

  2. scRNAseq scRNAseq Public

    Clone of the Bioconductor repository for the scRNAseq package.

    R 25 12

  3. batchelor batchelor Public

    Clone of the Bioconductor repository for the batchelor package.

    R 16 7

  4. CppIrlba CppIrlba Public

    A C++ port of the IRLBA algorithm, based on the C code in the R package.

    C++ 14 4

  5. TileDBArray TileDBArray Public

    Clone of the Bioconductor repository for the TileDBArray package.

    R 10

  6. PseudoCount2018 PseudoCount2018 Public

    Some thoughts on choosing an appropriate pseudo-count for log-transformation of scRNA-seq counts.

    TeX 9

3,805 contributions in the last year

Contribution Graph
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Activity overview

Contributed to tatami-inc/tatami, libscran/scran_aggregate, knncolle/knncolle and 182 other repositories
Loading A graph representing LTLA's contributions from April 14, 2024 to April 17, 2025. The contributions are 91% commits, 5% pull requests, 4% issues, 0% code review.

Contribution activity

April 2025

Created a pull request in tatami-inc/eminem that received 1 comment

Refactor parser to support multiple blanks, empty lines.

+3,626 −1,467 lines changed • 1 comment
Opened 5 other pull requests in 5 repositories

Created an issue in crisprVerse/kaori that received 1 comment

JP please make me an org owner for a while

@Jfortin1 I think I need to be an owner of the entire crisprVerse org in order to have administration rights on this specific repository (specifica…

1 comment
Opened 2 other issues in 2 repositories
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