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Describe the goals of the changes to the analysis module.
We plan to reformat the NBAtlas tumor metadata we received for input to this module. Rather than a data frame object, we'd like this to be a plain text file of cell ids.
What will your pull request contain?
Small helper script for posterity, in a separate scripts/setup folder. As of now, we would not want this script to be run in CI, and its documentation should explain that it's only used for an initial conversion. Note that this would have to change if the metadata we're using ends up being public at some point, but that is not our call.
Will you require additional software beyond what is already in the analysis module?
No
Will you require different computational resources beyond what the analysis module already uses?
No
If known, when do you expect to file the pull request?
This sprint
The text was updated successfully, but these errors were encountered:
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Part of #1151
Describe the goals of the changes to the analysis module.
We plan to reformat the
NBAtlas
tumor metadata we received for input to this module. Rather than a data frame object, we'd like this to be a plain text file of cell ids.What will your pull request contain?
Small helper script for posterity, in a separate
scripts/setup
folder. As of now, we would not want this script to be run in CI, and its documentation should explain that it's only used for an initial conversion. Note that this would have to change if the metadata we're using ends up being public at some point, but that is not our call.Will you require additional software beyond what is already in the analysis module?
No
Will you require different computational resources beyond what the analysis module already uses?
No
If known, when do you expect to file the pull request?
This sprint
The text was updated successfully, but these errors were encountered: