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When we return to working on this module for neuroblastoma samples, we should move this function into its own utils file to keep things modular since we anticipate using it more in the future.
What will your pull request contain?
New utils file with functions that are imported in relevant notebooks
Will you require additional software beyond what is already in the analysis module?
No
Will you require different computational resources beyond what the analysis module already uses?
No
If known, when do you expect to file the pull request?
No response
The text was updated successfully, but these errors were encountered:
If you are filing this issue based on a specific GitHub Discussion, please link to the relevant Discussion.
Part of #1143
Describe the goals of the changes to the analysis module.
We have this function in the exploratory notebooks in the
infercnv-consensus-cell-type
module appearing in multiple exploratory notebooks:OpenScPCA-analysis/analyses/infercnv-consensus-cell-type/exploratory-notebooks/02_ewings-reference-cnv.Rmd
Lines 34 to 62 in 47d2188
When we return to working on this module for neuroblastoma samples, we should move this function into its own utils file to keep things modular since we anticipate using it more in the future.
What will your pull request contain?
New utils file with functions that are imported in relevant notebooks
Will you require additional software beyond what is already in the analysis module?
No
Will you require different computational resources beyond what the analysis module already uses?
No
If known, when do you expect to file the pull request?
No response
The text was updated successfully, but these errors were encountered: