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sscheck: Drop createFastqForIndexReads for 10X samples as we don't support I1 / I2 samples with ora compressed read fastqs #934

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alexiswl opened this issue Feb 19, 2025 · 0 comments
Open

sscheck: Drop createFastqForIndexReads for 10X samples as we don't support I1 / I2 samples with ora compressed read fastqs #934

alexiswl opened this issue Feb 19, 2025 · 0 comments
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10X samples no longer require the index fastqs. When running createFastqForIndexReads across all samples we are also now generating index files for unassuming libraries who otherwise would not be expecting to have associated index reads.
@alexiswl alexiswl self-assigned this Feb 19, 2025
@williamputraintan williamputraintan transferred this issue from umccr/samplesheet-check-backend Mar 30, 2025
@williamputraintan williamputraintan changed the title Drop createFastqForIndexReads for 10X samples as we don't support I1 / I2 samples with ora compressed read fastqs sscheck: Drop createFastqForIndexReads for 10X samples as we don't support I1 / I2 samples with ora compressed read fastqs Mar 30, 2025
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