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renamed fcatpy to fcat
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MANIFEST.in

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recursive-include fcatpy *
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recursive-include fcat *

README.md

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# fCATpy
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[![PyPI version](https://badge.fury.io/py/fcatpy.svg)](https://pypi.org/project/fcatpy/)
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# fCAT
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[![PyPI version](https://badge.fury.io/py/fcat.svg)](https://pypi.org/project/fcat/)
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[![License: GPL v3](https://img.shields.io/badge/License-GPLv3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0)
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[![Build Status](https://travis-ci.com/BIONF/fCATpy.svg?branch=master)](https://travis-ci.com/BIONF/fCATpy)
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[![Build Status](https://travis-ci.com/BIONF/fCAT.svg?branch=master)](https://travis-ci.com/BIONF/fCAT)
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Python package for fCAT, a feature-aware completeness assessment tool
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# How to install
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*fCAT* tool is distributed as a python package called *fcatpy*. It is compatible with [Python ≥ v3.7](https://www.python.org/downloads/).
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*fCAT* tool is distributed as a python package called *fcat*. It is compatible with [Python ≥ v3.7](https://www.python.org/downloads/).
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You can install *fcatpy* using `pip`:
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You can install *fcat* using `pip`:
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```
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# python3 -m pip install fcatpy
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python3 -m pip install git+https://github.com/BIONF/fCATpy
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# python3 -m pip install fcat
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python3 -m pip install git+https://github.com/BIONF/fCAT
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```
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or, in case you do not have admin rights, and don't use package systems like Anaconda to manage environments you need to use the `--user` option:
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```
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# python3 -m pip install --user fcatpy
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python3 -m pip install --user git+https://github.com/BIONF/fCATpy
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# python3 -m pip install --user fcat
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python3 -m pip install --user git+https://github.com/BIONF/fCAT
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```
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and then add the following line to the end of your **~/.bashrc** or **~/.bash_profile** file, restart the current terminal to apply the change (or type `source ~/.bashrc`):
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```
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# Bugs
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Any bug reports or comments, suggestions are highly appreciated. Please [open an issue on GitHub](https://github.com/BIONF/fCATpy/issues/new) or be in touch via email.
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Any bug reports or comments, suggestions are highly appreciated. Please [open an issue on GitHub](https://github.com/BIONF/fCAT/issues/new) or be in touch via email.
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# Contributors
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- [Vinh Tran](https://github.com/trvinh)

fcatpy/__init__.py

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fcatpy/assessCompleteness.py

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