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lines changed Original file line number Diff line number Diff line change @@ -34,13 +34,19 @@ course:
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# a condarc file on a cluster, copy and adjust
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# for your cluster.
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condarcfile : " common/condarc_barnard.tex"
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+
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+
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+ # We provide a common software stack to avoid long
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+ # installation sessions.
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+ softwarepath : " /projects/p_nhr_snakemake/software_stack"
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# these are the path names to contain sample data
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# see the README for explanations.
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- pathtosetup : " /projects/p_nhr_snakemake"
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- pathtosolutions : " "
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+ pathtosetup : " /projects/p_nhr_snakemake/tutorial "
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+ pathtosolutions : " /projects/p_nhr_snakemake/solutions "
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# after copying the setup path is:
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- tutorialpath : " ~/tasks/tutorial"
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- # This is the selected slide to explain the 'Hello World' script
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+ tutorialpath : " ~/tasks"
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+ deploy_url : " https://github.com/snakemake-workflows/rna-seq-kallisto-sleuth"
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+ # This is the selected slide to explain the 'Hello World' script
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# to introduce SLURM. It requires different account and partition
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# settings on every cluster.
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hello_world_script : " common/Hello_World_HPC_Barnard.tex"
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