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FL.2.3 sublineage with S:L455F, F456L (11 seq, 3 countries) #818

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Walde1nsamkeit opened this issue Sep 15, 2023 · 6 comments
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FL.2.3 sublineage with S:L455F, F456L (11 seq, 3 countries) #818

Walde1nsamkeit opened this issue Sep 15, 2023 · 6 comments
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FLip = S:L455F / S:F456L

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@Walde1nsamkeit
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Walde1nsamkeit commented Sep 15, 2023 •
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Subbranch of #526 (comment) branch A

Query: T4579A, G22927T, G28839T,-C7765T
FL.2.3> G28839T(N:R189L)> T22928C(S:F456L)> T12670C, G22927T(S:L455F), T27288C, C29769T

Earliest sequence: 08-23 Deyang, Sichuan, China EPI_ISL_18261463
Latest sequence: 09-19 Jincheng, Shanxi, China EPI_ISL_18401824

Sequences:
USA/WA-GBW-H10-016-4168/2023|EPI_ISL_18239091|2023-08-31
Sichuan/DYCDC-0164/2023|EPI_ISL_18261463|2023-08-23
Shanxi/JCCDC-JCCX0494/2023|EPI_ISL_18401824|2023-09-19

https://nextstrain.org/fetch/github.com/Over-There-Is/subtreeAuspice/raw/main/subtreeAuspice_genome_39469_cdac30.json?label=id:node_6795306
2023-09-16 (2)
@FedeGueli FedeGueli added the FLip = S:L455F / S:F456L label Sep 15, 2023
@Walde1nsamkeit
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It is possible to be originated in Guangdong. Expect the next batch of sequences.

@FedeGueli FedeGueli changed the title FL.2.3 sublineage with S:L455F, F456L (2 seq, 2 countries) FL.2.3 sublineage with S:L455F, F456L (3 seq, 3 countries) Oct 2, 2023
@FedeGueli
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+1 Israel

@Walde1nsamkeit
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+1 Israel

It has not any one of T4579A, T12670C, A17615G, T27288C or C29769T, so I don't think it's related.

@Walde1nsamkeit
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2023-10-03 (9)

@FedeGueli
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thx i ve edited the query in: G28839T, G22927T,-C7765T

@FedeGueli FedeGueli changed the title FL.2.3 sublineage with S:L455F, F456L (3 seq, 3 countries) FL.2.3 sublineage with S:L455F, F456L (2 seq, 2 countries) Oct 2, 2023
@Walde1nsamkeit Walde1nsamkeit changed the title FL.2.3 sublineage with S:L455F, F456L (2 seq, 2 countries) FL.2.3 sublineage with S:L455F, F456L (3 seq, 2 countries) Oct 18, 2023
@Walde1nsamkeit
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+1

@Walde1nsamkeit Walde1nsamkeit mentioned this issue Nov 14, 2023
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@Walde1nsamkeit Walde1nsamkeit closed this as not planned Won't fix, can't repro, duplicate, stale Nov 14, 2023
@Walde1nsamkeit Walde1nsamkeit changed the title FL.2.3 sublineage with S:L455F, F456L (3 seq, 2 countries) FL.2.3 sublineage with S:L455F, F456L (12 seq, 3 countries) Dec 6, 2024
@Walde1nsamkeit Walde1nsamkeit changed the title FL.2.3 sublineage with S:L455F, F456L (12 seq, 3 countries) FL.2.3 sublineage with S:L455F, F456L (11 seq, 3 countries) Dec 6, 2024
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