Bump the pip group with 4 updates (#493)

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

Author: dependabot[bot]

pyproject.toml

@@ -3,19 +3,19 @@ build-backend = 'setuptools.build_meta'
 requires = [
   'gmsh<4.13.2',
   'meshio<5.3.6',
-  'pyvista[all]<0.45.1',
+  'pyvista[all]<0.45.3',
   'scooby<0.10.2',
-  'setuptools<80.1.1',
-  'shapely<2.0.8',
+  'setuptools<80.9.1',
+  'shapely<2.1.2',
 ]
 
 [project]
 dependencies = [
   'gmsh<4.13.2',
   'meshio<5.3.6',
-  'pyvista[all]<0.45.1',
+  'pyvista[all]<0.45.3',
   'scooby<0.10.2',
-  'shapely<2.0.8',
+  'shapely<2.1.2',
 ]
 dynamic = ["readme", "version"]
 name = "scikit-gmsh"
@@ -29,7 +29,7 @@ docs = [
   'sphinx-copybutton==0.5.2',
   'sphinx-design==0.6.1',
   'sphinx-gallery==0.19.0',
-  'sphinx-toolbox==3.9.0',
+  'sphinx-toolbox==4.0.0',
   'sphinx==8.1.3',
 ]
 test = ['pytest==8.3.5']