openMetadataInitiative

All

22 repositories

openMINDS_core
Public
The openMINDS core metadata model includes schemas that can be used to describe the general origin, location and content of research products.
openminds schema-module
MIT License
•19•22•34•2•Updated Jun 18, 2025Jun 18, 2025
openMINDS_actions
Public
CI/CD pipelines for openMINDS repositories using GitHub Actions.
tooling utils openminds
Python
•
MIT License
•1•0•4•3•Updated Jun 18, 2025Jun 18, 2025
openMINDS
Public
Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in the openMINDS syntax (*.schema.omi.json).
openminds metadata-model
MIT License
•3•1•16•3•Updated Jun 17, 2025Jun 17, 2025
openMINDS_Python
Public
Python package for the openMINDS metadata models. The package contains all openMINDS schemas as Python classes in addition to schema base classes and utility methods.
tooling target openminds programming-package
Python
•
MIT License
•2•1•15•1•Updated Jun 16, 2025Jun 16, 2025
openMINDS_documentation
Public
Read-The-Docs documentation for the openMINDS metadata framework.
documentation target openminds
MIT License
•4•0•23•4•Updated Jun 16, 2025Jun 16, 2025
openMINDS_instances
Public
Well defined metadata instances for selected schemas of the openMINDS metadata models.
openminds instance-libraries
Python
•
MIT License
•14•3•85•53•Updated Jun 16, 2025Jun 16, 2025
openMINDS_MATLAB
Public
A MATLAB toolbox for generating openMINDS-compliant linked metadata.
metadata linked-data neuroscience target openminds programming-package
MATLAB
•
MIT License
•3•4•12•1•Updated Jun 16, 2025Jun 16, 2025
bids2openminds
Public
A tool to generate openMINDS metadata from BIDS datasets
converter openminds
Python
•
MIT License
•6•5•14•3•Updated Jun 6, 2025Jun 6, 2025
openMINDS_LinkML
Public
Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in LinkML (*.yaml).
target schema-format openminds
MIT License
•1•1•1•0•Updated May 28, 2025May 28, 2025
openMINDS_stimulation
Public
A metadata model capturing in-depth descriptions of stimuli and stimulation protocols in neuroscience.
openminds schema-module
MIT License
•3•1•1•0•Updated May 28, 2025May 28, 2025
openMINDS_specimenPrep
Public
A metadata model capturing in-depth descriptions of specimen preparations.
openminds schema-module
MIT License
•2•1•0•1•Updated May 28, 2025May 28, 2025
openMINDS_SANDS
Public
A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.
openminds schema-module
Python
•
MIT License
•11•13•10•1•Updated May 28, 2025May 28, 2025
openMINDS_publications
Public
A metadata model for scholarly publications in neuroscience, including live papers
openminds schema-module
MIT License
•2•0•4•0•Updated May 28, 2025May 28, 2025
openMINDS_ephys
Public
A metadata model for capturing in-depth descriptions of electrophysiology experiments.
openminds schema-module
MIT License
•6•6•0•0•Updated May 28, 2025May 28, 2025
openMINDS_computation
Public
A metadata model for simulation, data analysis and visualization provenance in neuroscience
openminds schema-module
MIT License
•4•0•0•0•Updated May 28, 2025May 28, 2025
openMINDS_controlledTerms
Public
Metadata model for the consistent registration of well-defined terms as well as a corresponding library of terminologies (including links to ontological terms where applicable).
openminds schema-module
MIT License
•12•7•4•0•Updated May 28, 2025May 28, 2025
openMINDS_chemicals
Public
A metadata model for capturing in-depth descriptions of chemical substances and mixtures.
openminds schema-module
MIT License
•2•2•3•0•Updated May 28, 2025May 28, 2025
openMINDS_neuroimaging
Public
A metadata model for MRI experiments; an openMINDS extension
openminds schema-module
MIT License
•2•1•1•0•Updated Apr 9, 2025Apr 9, 2025
openMINDS_Java
Public
A Java library for openMINDS
target openminds programming-package
Java
•1•0•0•1•Updated Apr 4, 2025Apr 4, 2025
openMINDS_JSON-Schema
Public
Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in JSON-Schema (*.schema.json).
target schema-format openminds
MIT License
•2•0•2•0•Updated Mar 31, 2025Mar 31, 2025
openMINDS_OWL
Public
Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are expressed in OWL and available in multiple syntaxes.
target schema-format openminds
MIT License
•1•0•0•1•Updated Jan 24, 2025Jan 24, 2025
.github
Public
README repository for openMetadataInitiative organization.
0•0•0•0•Updated Sep 23, 2024Sep 23, 2024