Merge pull request #40 from openMetadataInitiative/lzehl_logo_update

logo and readme update

Author: lzehl

README.md

@@ -13,35 +13,79 @@
 
 The **openMINDS** repository hosts the complete collection of schemas for all metadata models of the **openMINDS metadata framework**. All schemas are formatted in the openMINDS syntax (*.schema.omi.json).
 
-To learn more about the openMINDS metadata framework please go to :arrow_right: [**ReadTheDocs**][docu-url].
+To generally learn more about the openMINDS metadata framework please go to :arrow_right: [**ReadTheDocs**][docu-url].  
+There you can explore the openMINDS :arrow_right: [**schema specifications**][docu-schemas-url], :arrow_right: [**instance libraries**][docu-instances-url], and more.
 
 ## How to contribute
 
-The openMINDS metadata framework is an open-source project and community contributions are highly appreciated.  
-If you want to contribute please follow our :arrow_right: [**contribution guidelines**][contribution-url].
-
-All issues or contributions around the openMINDS instance libraries should be discussed on the GitHub issue tracker of   
-:arrow_right: [**openMINDS_instances**][issuetracker-instances]
-
-All issues or contributions around the openMINDS schemas can be discussed first here on the main GitHub issue tracker of  
-:arrow_right: [**openMINDS**][issuetracker-main]  
-... or directly on an GitHub issue tracker of the submodule the schema belongs to:  
-:arrow_right: [**openMINDS_chemicals**][issuetracker-chemicals]  
-:arrow_right: [**openMINDS_controlledTerms**][issuetracker-controlledTerms]  
-:arrow_right: [**openMINDS_computation**][issuetracker-computation]  
-:arrow_right: [**openMINDS_core**][issuetracker-core]  
-:arrow_right: [**openMINDS_ephys**][issuetracker-ephys]  
-:arrow_right: [**openMINDS_publications**][issuetracker-publications]  
-:arrow_right: [**openMINDS_SANDS**][issuetracker-SANDS]  
-:arrow_right: [**openMINDS_specimenPrep**][issuetracker-specimenPrep]  
-:arrow_right: [**openMINDS_stimulation**][issuetracker-stimulation]  
+The openMINDS metadata framework is an open-source project and community contributions are highly appreciated. If you want to contribute please follow our :arrow_right: [**contribution guidelines**][contribution-url].
+
+General questions should be raised and discussed in our :arrow_right: [**community forum**][community-forum].  
+Alternatively you can email us: :arrow_right: **[email protected]**. 
+
+General contributions should be raised and discussed on the main :arrow_right: [**openMINDS issue tracker**][issuetracker-main].  
+
+Specific schema contributions should be raised and discussed in the respective submodule:  
+:arrow_right: [**openMINDS_chemicals issue tracker**][issuetracker-chemicals]  
+:arrow_right: [**openMINDS_computation issue tracker**][issuetracker-computation]  
+:arrow_right: [**openMINDS_controlledTerms issue tracker**][issuetracker-controlledTerms]  
+:arrow_right: [**openMINDS_core issue tracker**][issuetracker-core]  
+:arrow_right: [**openMINDS_ephys issue tracker**][issuetracker-ephys]  
+:arrow_right: [**openMINDS_publications issue tracker**][issuetracker-publications]  
+:arrow_right: [**openMINDS_SANDS issue tracker**][issuetracker-SANDS]  
+:arrow_right: [**openMINDS_specimenPrep issue tracker**][issuetracker-specimenPrep]  
+:arrow_right: [**openMINDS_stimulation issue tracker**][issuetracker-stimulation]  
+
+Instance contributions should be raised and discussed on the :arrow_right: [**openMINDS_instances issue tracker**][issuetracker-instances].
+
+## How to cite
+
+If you want to reference openMINDS in general, please use always our main RRID Portal record:  
+:arrow_right:  `openMINDS metadata framework (RRID:SCR_023173)`  
+
+We also have a citable FAIRsharing.org record:  
+:arrow_right: `FAIRsharing.org: openMINDS; openMINDS metadata framework, DOI: https://doi.org/10.25504/FAIRsharing.6ac6aa`
+
+For referencing specific openMINDS submodules, please use the following RRID Portal records:  
+:arrow_right:  `openMINDS chemicals metadata model (RRID:SCR_026248)`  
+:arrow_right:  `openMINDS computation metadata model (RRID:SCR_026249)`  
+:arrow_right:  `openMINDS controlledTerms metadata model (RRID:SCR_026247)`  
+:arrow_right:  `openMINDS core metadata model (RRID:SCR_026246)`  
+:arrow_right:  `openMINDS ephys metadata model (RRID:SCR_026250)`  
+:arrow_right:  `openMINDS publications metadata model (RRID:SCR_026251)`  
+:arrow_right:  `openMINDS SANDS metadata model (RRID:SCR_023498)`  
+:arrow_right:  `openMINDS specimenPrep metadata model (RRID:SCR_026252)`  
+:arrow_right:  `openMINDS stimulation metadata model (RRID:SCR_026253)`  
+
+
+## Funding and acknowledgements
+
+The openMINDS metadata framework development started in the [**Human Brain Project (HBP)**][hbp-website], funded from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Specific Grant Agreements [**SGA-1 (No.720270)**][hbp-sga1-doi], [**SGA-2 (No.785907)**][hbp-sga2-doi], and [**SGA-3 (No. 945539)**][hbp-sga3-doi]. 
+
+The framework is further developed as part of the EBRAINS 2.0 project, funded from the European Union's Research and Innovation Program Horizon Europe under Grant Agreement [**GA (No.101147319)**][ebrains2-doi].
+
+The framework also receives support from the [**Helmholtz International BigBrain Analytics and Learning Laboratory (HIBALL)**][hiball-url].
+
+## Collaboration partners
+
+The openMINDS metadata framework is closely collaborating with the [**InterLex Project**][interlex-dashboard] of the [**SciCrunch Data and Resource Infrastructure**][scicrunch-website] and the [**KnowledgeSpace**][ks-website] hosted by the [**International Neuroinformatics Coordinating Facility (INCF)**][incf-website].
 
 <!-- MARKDOWN LINKS & IMAGES -->
-<!-- https://www.markdownguide.org/basic-syntax/#reference-style-links -->
+[community-forum]: https://neurostars.org/t/about-the-openminds-category/31428
 [contribution-url]: https://openminds-documentation.readthedocs.io/en/latest/shared/contribution_guidelines.html
 [contributors-url]: https://github.com/openMetadataInitiative/openMINDS/graphs/contributors
 [contributors-shield]: https://img.shields.io/github/contributors/openMetadataInitiative/openMINDS
+[docu-instances-url]: https://openminds-documentation.readthedocs.io/en/latest/instance_libraries.html
 [docu-url]: https://openminds-documentation.readthedocs.io
+[docu-schemas-url]: https://openminds-documentation.readthedocs.io/en/latest/schema_specifications.html
+[ebrains2-doi]: https://doi.org/10.3030/101147319
+[hiball-url]: https://bigbrainproject.org/hiball.html
+[hbp-sga1-doi]: https://doi.org/10.3030/720270
+[hbp-sga2-doi]: https://doi.org/10.3030/785907
+[hbp-sga3-doi]: https://doi.org/10.3030/945539
+[hbp-website]: https://www.humanbrainproject.eu
+[incf-website]: https://www.incf.org
+[interlex-dashboard]: https://scicrunch.org/scicrunch/interlex/dashboard
 [issuetracker-chemicals]: https://github.com/openMetadataInitiative/openMINDS_chemicals/issues
 [issuetracker-controlledTerms]: https://github.com/openMetadataInitiative/openMINDS_controlledTerms/issues
 [issuetracker-computation]: https://github.com/openMetadataInitiative/openMINDS_computation/issues
@@ -53,6 +97,7 @@ All issues or contributions around the openMINDS schemas can be discussed first
 [issuetracker-SANDS]: https://github.com/openMetadataInitiative/openMINDS_SANDS/issues
 [issuetracker-specimenPrep]: https://github.com/openMetadataInitiative/openMINDS_specimenPrep/issues
 [issuetracker-stimulation]: https://github.com/openMetadataInitiative/openMINDS_stimulation/issues
-[libraries-url]: https://openminds-documentation.readthedocs.io/en/latest/instance_libraries.html
+[ks-website]: https://knowledge-space.org
 [license-url]: https://raw.githubusercontent.com/openMetadataInitiative/openMINDS/main/LICENSE
-[license-shield]: https://img.shields.io/github/license/openMetadataInitiative/openMINDS_documentation
+[license-shield]: https://img.shields.io/github/license/openMetadataInitiative/openMINDS
+[scicrunch-website]: https://scicrunch.org