fixing missing bedtools dependency

Author: nrminor

pixi.lock

@@ -92,6 +92,7 @@ loguru = ">=0.7.2,<0.8"
 lxml = ">=5.2.2,<5.3"
 cffi = ">=1.15.0,<1.17.0"
 bbmap = ">=39.1,<40"
+bedtools = ">=2.31.1,<3"
 
 [tool.uv]
 dev-dependencies = [