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DESCRIPTION

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this package provides a parallel implementation of the Map function for high
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performance computing systems managed by schedulers 'IBM Spectrum LSF'
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(<https://www.ibm.com/products/hpc-workload-management>),
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'OpenLava' (<http://www.openlava.org/>), 'Univa Grid Engine'/'Oracle Grid
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Engine' (<http://www.univa.com/>), 'Slurm' (<http://slurm.schedmd.com/>),
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'OpenLava' (<https://www.openlava.org/>), 'Univa Grid Engine'/'Oracle Grid
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Engine' (<https://www.univa.com/>), 'Slurm' (<https://slurm.schedmd.com/>),
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'TORQUE/PBS'
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(<https://adaptivecomputing.com/cherry-services/torque-resource-manager/>),
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or 'Docker Swarm' (<https://docs.docker.com/engine/swarm/>).

R/Joins.R

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#' @description
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#' These helper functions perform join operations on data tables.
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#' Most of them are basically one-liners.
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#' See \url{http://rpubs.com/ronasta/join_data_tables} for a overview of join operations in
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#' See \url{https://rpubs.com/ronasta/join_data_tables} for a overview of join operations in
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#' data table or alternatively \pkg{dplyr}'s vignette on two table verbs.
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#'
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#' @param x [\code{\link{data.frame}}]\cr

R/clusterFunctionsSGE.R

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#'
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#' @description
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#' Cluster functions for Univa Grid Engine / Oracle Grid Engine /
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#' Sun Grid Engine (\url{http://www.univa.com/}).
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#' Sun Grid Engine (\url{https://www.univa.com/}).
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#'
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#' Job files are created based on the brew template \code{template}. This
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#' file is processed with brew and then submitted to the queue using the

R/clusterFunctionsSlurm.R

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#' @title ClusterFunctions for Slurm Systems
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#'
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#' @description
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#' Cluster functions for Slurm (\url{http://slurm.schedmd.com/}).
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#' Cluster functions for Slurm (\url{https://slurm.schedmd.com/}).
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#'
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#' Job files are created based on the brew template \code{template.file}. This
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#' file is processed with brew and then submitted to the queue using the

README.md

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# batchtools
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[![JOSS Publicatoin](http://joss.theoj.org/papers/10.21105/joss.00135/status.svg)](https://doi.org/10.21105/joss.00135)
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[![CRAN Status Badge](http://www.r-pkg.org/badges/version/batchtools)](https://cran.r-project.org/package=batchtools)
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[![JOSS Publicatoin](https://joss.theoj.org/papers/10.21105/joss.00135/status.svg)](https://doi.org/10.21105/joss.00135)
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[![CRAN Status Badge](https://www.r-pkg.org/badges/version/batchtools)](https://cran.r-project.org/package=batchtools)
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[![Build Status](https://travis-ci.org/mllg/batchtools.svg?branch=master)](https://travis-ci.org/mllg/batchtools)
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[![Build Status](https://ci.appveyor.com/api/projects/status/ypp14tiiqfhnv92k/branch/master?svg=true)](https://ci.appveyor.com/project/mllg/batchtools/branch/master)
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man/JoinTables.Rd

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man/makeClusterFunctionsSGE.Rd

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man/makeClusterFunctionsSlurm.Rd

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paper/paper.md

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* Local (non-blocking) parallel execution using `parallel`'s multicore backend [@R] or [`snow`](https://cran.r-project.org/package=snow)'s socket mode [@snow].
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* Execution on loosely connected machines using SSH (including basic resource usage control).
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* [Docker Swarm](https://docs.docker.com/engine/swarm/)
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* [IBM Spectrum LSF](http://www-03.ibm.com/systems/spectrum-computing/products/lsf/)
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* [OpenLava](http://www.openlava.org/)
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* [Univa Grid Engine](http://www.univa.com/) (formerly Oracle Grind Engine and Sun Grid Engine)
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* [Slurm Workload Manager](http://slurm.schedmd.com/)
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* [TORQUE/PBS Resource Manager](http://www.adaptivecomputing.com/products/open-source/torque/)
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* [IBM Spectrum LSF](https://www.ibm.com/products/hpc-workload-management)
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* [OpenLava](https://www.openlava.org/)
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* [Univa Grid Engine](https://www.univa.com/) (formerly Oracle Grind Engine and Sun Grid Engine)
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* [Slurm Workload Manager](https://slurm.schedmd.com/)
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* [TORQUE/PBS Resource Manager](https://adaptivecomputing.com/cherry-services/moab-hpc/)
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Extensibility and user customization are important features as configuration on high-performance computing clusters is often heavily tailored towards very specific requirements or special hardware.
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Hence, the interaction with the schedulers uses a template engine for improved flexibility.

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