Allow collection builders to hide original datasets.

Author: jmchilton

client/galaxy/scripts/mvc/collection/base-creator.js

@@ -21,6 +21,10 @@ var CollectionCreatorMixin = {
         }
     },
 
+    _changeHideOriginals: function( ev ) {
+        this.hideOriginals = this.$( '.hide-originals' ).prop("checked");
+    },
+
     // ........................................................................ footer
     /** handle a collection name change */
     _changeName : function( ev ){
@@ -89,6 +93,23 @@ var CollectionCreatorMixin = {
         }
     },
 
+    _setUpCommonSettings : function( ) {
+        this.hideOriginals = false;
+    },
+
+    /** render the footer, completion controls, and cancel controls */
+    _renderFooter : function( speed, callback ){
+        var instance = this;
+        var $footer = this.$( '.footer' ).empty().html( this.templates.footer() );
+        _.each( this.footerSettings, function( property, selector ) {
+            this.$( selector ).prop( 'checked', instance[ property ] );
+        });
+        if( typeof this.oncancel === 'function' ){
+            this.$( '.cancel-create.btn' ).show();
+        }
+        return $footer;
+    },
+
     _creatorTemplates: {
         main : _.template([
             '<div class="header flex-row no-flex"></div>',

client/galaxy/scripts/mvc/collection/list-collection-creator.js

@@ -179,6 +179,10 @@ var ListCollectionCreator = Backbone.View.extend( BASE_MVC.LoggableMixin ).exten
         highlightClr    : 'rgba( 64, 255, 255, 1.0 )'
     },
 
+    footerSettings : {
+        '.hide-originals': 'hideOriginals'
+    },
+
     /** set up initial options, instance vars, behaviors */
     initialize : function( attributes ){
         this.metric( 'ListCollectionCreator.initialize', attributes );
@@ -191,6 +195,7 @@ var ListCollectionCreator = Backbone.View.extend( BASE_MVC.LoggableMixin ).exten
         /** unordered, original list - cache to allow reversal */
         creator.initialElements = attributes.elements || [];
 
+        this._setUpCommonSettings();
         this._instanceSetUp();
         this._elementsSetUp();
         this._setUpBehaviors();
@@ -348,15 +353,6 @@ var ListCollectionCreator = Backbone.View.extend( BASE_MVC.LoggableMixin ).exten
         return $middle;
     },
 
-    /** render the footer, completion controls, and cancel controls */
-    _renderFooter : function( speed, callback ){
-        var $footer = this.$( '.footer' ).empty().html( this.templates.footer() );
-        if( typeof this.oncancel === 'function' ){
-            this.$( '.cancel-create.btn' ).show();
-        }
-        return $footer;
-    },
-
     /** add any jQuery/bootstrap/custom plugins to elements rendered */
     _addPluginComponents : function(){
         this.$( '.help-content i' ).hoverhighlight( '.collection-creator', this.highlightClr );
@@ -513,7 +509,7 @@ var ListCollectionCreator = Backbone.View.extend( BASE_MVC.LoggableMixin ).exten
             });
 
         creator.blocking = true;
-        return creator.creationFn( elements, name )
+        return creator.creationFn( elements, name, creator.hideOriginals )
             .always( function(){
                 creator.blocking = false;
             })
@@ -609,6 +605,7 @@ var ListCollectionCreator = Backbone.View.extend( BASE_MVC.LoggableMixin ).exten
         // footer
         'change .collection-name'       : '_changeName',
         'keydown .collection-name'      : '_nameCheckForEnter',
+        'change .hide-originals'        : '_changeHideOriginals',
         'click .cancel-create'          : '_cancelCreate',
         'click .create-collection'      : '_clickCreate'//,
     },
@@ -777,6 +774,12 @@ var ListCollectionCreator = Backbone.View.extend( BASE_MVC.LoggableMixin ).exten
         /** creation and cancel controls */
         footer : _.template([
             '<div class="attributes clear">',
+                '<div class="clear">',
+                    '<label class="setting-prompt pull-right">',
+                        _l( 'Hide original elements' ), '?',
+                        '<input class="hide-originals pull-right" type="checkbox" />',
+                    '</label>',
+                '</div>',
                 '<div class="clear">',
                     '<input class="collection-name form-control pull-right" ',
                         'placeholder="', _l( 'Enter a name for your new collection' ), '" />',
@@ -948,7 +951,7 @@ var listCollectionCreatorModal = function _listCollectionCreatorModal( elements,
 function createListCollection( contents ){
     var elements = contents.toJSON(),
         promise = listCollectionCreatorModal( elements, {
-            creationFn : function( elements, name ){
+            creationFn : function( elements, name, hideSourceItems ){
                 elements = elements.map( function( element ){
                     return {
                         id      : element.id,
@@ -957,7 +960,7 @@ function createListCollection( contents ){
                         src     : ( element.history_content_type === 'dataset'? 'hda' : 'hdca' )
                     };
                 });
-                return contents.createHDCA( elements, 'list', name );
+                return contents.createHDCA( elements, 'list', name, hideSourceItems );
             }
         });
     return promise;