Permalink for satellite-methane dataset Tier 3

[paolocristofanelli]

Data Type

Satellite ECVs - Atmospheric Composition

Assessment Category

extremes-detection

Dataset Name

satellite-methane

Question Number

2

Workflow ID

eqctier3-8515b13e-0b28-4b26-b541-45b2a8312dc5

Zipped Notebook

satellite_satellite_methane_extreme-detection_q02_20250323.zip

Environment

name: wp5
channels:
  - conda-forge
dependencies:
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  - python_abi=3.11=5_cp311
  - pytz=2024.1=pyhd8ed1ab_0
  - pyyaml=6.0.2=py311h2dc5d0c_2
  - pyzmq=26.3.0=py311h7deb3e3_0
  - qhull=2020.2=h434a139_5
  - qt6-main=6.8.2=h588cce1_0
  - rasterio=1.4.3=py311h5394301_0
  - rav1e=0.6.6=he8a937b_2
  - re2=2024.07.02=h9925aae_2
  - readline=8.2=h8c095d6_2
  - referencing=0.36.2=pyh29332c3_0
  - regionmask=0.13.0=pyhd8ed1ab_0
  - requests=2.32.3=pyhd8ed1ab_1
  - rfc3339-validator=0.1.4=pyhd8ed1ab_1
  - rfc3986-validator=0.1.1=pyh9f0ad1d_0
  - rich=13.9.4=pyhd8ed1ab_1
  - rioxarray=0.18.2=pyhd8ed1ab_0
  - rpds-py=0.23.1=py311h687327b_0
  - s2n=1.5.11=h072c03f_0
  - scikit-learn=1.6.1=py311h57cc02b_0
  - scipy=1.15.2=py311h8f841c2_0
  - seaborn=0.13.2=hd8ed1ab_3
  - seaborn-base=0.13.2=pyhd8ed1ab_3
  - send2trash=1.8.3=pyh0d859eb_1
  - setuptools=75.8.2=pyhff2d567_0
  - shapely=2.0.7=py311h3dc67b8_1
  - shellingham=1.5.4=pyhd8ed1ab_1
  - simpervisor=1.0.0=pyhd8ed1ab_1
  - six=1.17.0=pyhd8ed1ab_0
  - snappy=1.2.1=h8bd8927_1
  - sniffio=1.3.1=pyhd8ed1ab_1
  - snowballstemmer=2.2.0=pyhd8ed1ab_0
  - snuggs=1.4.7=pyhd8ed1ab_2
  - sortedcontainers=2.4.0=pyhd8ed1ab_1
  - soupsieve=2.5=pyhd8ed1ab_1
  - sparse=0.15.5=pyh72ffeb9_0
  - sphinx=7.4.7=pyhd8ed1ab_0
  - sphinx-book-theme=1.1.4=pyh29332c3_0
  - sphinx-comments=0.0.3=pyhd8ed1ab_1
  - sphinx-copybutton=0.5.2=pyhd8ed1ab_1
  - sphinx-design=0.6.1=pyhd8ed1ab_2
  - sphinx-external-toc=1.0.1=pyhd8ed1ab_1
  - sphinx-jupyterbook-latex=1.0.0=pyhd8ed1ab_1
  - sphinx-multitoc-numbering=0.1.3=pyhd8ed1ab_1
  - sphinx-thebe=0.3.1=pyhd8ed1ab_1
  - sphinx-togglebutton=0.3.2=pyhd8ed1ab_0
  - sphinxcontrib-applehelp=2.0.0=pyhd8ed1ab_1
  - sphinxcontrib-bibtex=2.6.3=pyhd8ed1ab_1
  - sphinxcontrib-devhelp=2.0.0=pyhd8ed1ab_1
  - sphinxcontrib-htmlhelp=2.1.0=pyhd8ed1ab_1
  - sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_1
  - sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_1
  - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_1
  - sqlalchemy=2.0.39=py311h9ecbd09_1
  - sqlite=3.49.1=h9eae976_1
  - stack_data=0.6.3=pyhd8ed1ab_1
  - statsmodels=0.14.4=py311h9f3472d_0
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  - svt-av1=3.0.1=h5888daf_0
  - tabulate=0.9.0=pyhd8ed1ab_2
  - tblib=3.0.0=pyhd8ed1ab_1
  - tenacity=9.0.0=pyhd8ed1ab_1
  - terminado=0.18.1=pyh0d859eb_0
  - threadpoolctl=3.6.0=pyhecae5ae_0
  - tinycss2=1.4.0=pyhd8ed1ab_0
  - tk=8.6.13=noxft_h4845f30_101
  - toml=0.10.2=pyhd8ed1ab_1
  - tomli=2.2.1=pyhd8ed1ab_1
  - toolz=1.0.0=pyhd8ed1ab_1
  - tornado=6.4.2=py311h9ecbd09_0
  - tqdm=4.67.1=pyhd8ed1ab_1
  - traitlets=5.14.3=pyhd8ed1ab_1
  - typer=0.15.2=pyhff008b6_0
  - typer-slim=0.15.2=pyh29332c3_0
  - typer-slim-standard=0.15.2=h801b22e_0
  - types-python-dateutil=2.9.0.20241206=pyhd8ed1ab_0
  - typing-extensions=4.12.2=hd8ed1ab_1
  - typing_extensions=4.12.2=pyha770c72_1
  - typing_utils=0.1.0=pyhd8ed1ab_1
  - tzdata=2025a=h78e105d_0
  - uc-micro-py=1.0.3=pyhd8ed1ab_1
  - udunits2=2.2.28=h40f5838_3
  - unicodedata2=16.0.0=py311h9ecbd09_0
  - uri-template=1.3.0=pyhd8ed1ab_1
  - uriparser=0.9.8=hac33072_0
  - urllib3=2.3.0=pyhd8ed1ab_0
  - wayland=1.23.1=h3e06ad9_0
  - wcwidth=0.2.13=pyhd8ed1ab_1
  - webcolors=24.11.1=pyhd8ed1ab_0
  - webencodings=0.5.1=pyhd8ed1ab_3
  - websocket-client=1.8.0=pyhd8ed1ab_1
  - wheel=0.45.1=pyhd8ed1ab_1
  - wrapt=1.17.2=py311h9ecbd09_0
  - x265=3.5=h924138e_3
  - xarray=2025.1.2=pyhd8ed1ab_0
  - xarraymannkendall=1.4.5=pyhd8ed1ab_0
  - xcb-util=0.4.1=hb711507_2
  - xcb-util-cursor=0.1.5=hb9d3cd8_0
  - xcb-util-image=0.4.0=hb711507_2
  - xcb-util-keysyms=0.4.1=hb711507_0
  - xcb-util-renderutil=0.3.10=hb711507_0
  - xcb-util-wm=0.4.2=hb711507_0
  - xerces-c=3.2.5=h988505b_2
  - xesmf=0.8.8=pyhd8ed1ab_1
  - xhistogram=0.3.2=pyhd8ed1ab_0
  - xkeyboard-config=2.43=hb9d3cd8_0
  - xorg-libice=1.1.2=hb9d3cd8_0
  - xorg-libsm=1.2.5=he73a12e_0
  - xorg-libx11=1.8.11=h4f16b4b_0
  - xorg-libxau=1.0.12=hb9d3cd8_0
  - xorg-libxcomposite=0.4.6=hb9d3cd8_2
  - xorg-libxcursor=1.2.3=hb9d3cd8_0
  - xorg-libxdamage=1.1.6=hb9d3cd8_0
  - xorg-libxdmcp=1.1.5=hb9d3cd8_0
  - xorg-libxext=1.3.6=hb9d3cd8_0
  - xorg-libxfixes=6.0.1=hb9d3cd8_0
  - xorg-libxi=1.8.2=hb9d3cd8_0
  - xorg-libxrandr=1.5.4=hb9d3cd8_0
  - xorg-libxrender=0.9.12=hb9d3cd8_0
  - xorg-libxtst=1.2.5=hb9d3cd8_3
  - xorg-libxxf86vm=1.1.6=hb9d3cd8_0
  - xskillscore=0.0.26=pyhd8ed1ab_1
  - xyzservices=2025.1.0=pyhd8ed1ab_0
  - yaml=0.2.5=h7f98852_2
  - yarl=1.18.3=py311h2dc5d0c_1
  - zarr=3.0.5=pyhd8ed1ab_0
  - zeromq=4.3.5=h3b0a872_7
  - zict=3.0.0=pyhd8ed1ab_1
  - zipp=3.21.0=pyhd8ed1ab_1
  - zlib=1.3.1=hb9d3cd8_2
  - zstandard=0.23.0=py311h9ecbd09_1
  - zstd=1.5.7=hb8e6e7a_1
  - pip:
      - alembic==1.15.1
      - c3s-eqc-automatic-quality-control==0.1.2.dev114+g8ac355a
      - cacholote==1.6.1
      - cgul==0.0.4
      - earthkit-meteo==0.3.0
      - eccodes==2.40.0
      - ecmwflibs==0.6.3
      - kaleido==0.2.1
      - mako==1.3.9
      - pdbufr==0.12.2
      - pymannkendall==1.4.3
      - sqlalchemy-utils==0.41.2
prefix: /data/common/miniforge3/envs/wp5

Anything else we need to know?

No response

[malmans2]

Hi @paolocristofanelli,

The workflow ID is not correct. If you go to the CIM you should be able a to see a box with it.
The correct workflow ID looks like this: eqctier3-1123e4567-e89b-12d3-a456-42665544000

Could you please share the right one?

[malmans2]

The dataset name is also incorrect. You should use the same name used to download data with cdsapi and/or our download_and_transform function. I believe it's "satellite-methane" for this notebook. Could you please confirm?

[paolocristofanelli]

Hi @malmans2. I confirm, collection_id = "satellite-methane"

[malmans2]

Thanks. I’ve updated the form. We will wait for the correct workflow ID before releasing the permalink.

[paolocristofanelli]

Here the Workflow ID:
eqctier3-8515b13e-0b28-4b26-b541-45b2a8312dc5

[micguerr-bopen]

Thanks. I've updated the workflow ID in the form above.

[micguerr-bopen]

Permalink: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/a991b3ca6021b4bbfeb718d9975fc6fd27ad1e82/Satellite_ECVs/Atmospheric_Composition/satellite_satellite-methane_extremes-detection_q02.ipynb

Please ensure that the notebook name is correct. If you need to make any modifications (e.g., addressing the reviewer's comments), please share the new version of the notebook here, and I will provide a new permalink. Let me know once the notebook is accepted, and I will merge the PR into the main branch.

PREVIEW

[micguerr-bopen]

In order to make the notebook compatible with the template I modified I couple of things:

• One of the sub-section titles had the wrong heading level:
  ## Temporal variability of mid-tropospheric CH4 over the region -> #### Temporal variability of mid-tropospheric CH4 over the region

• There were a couple of web links that were not recognized by the automatic check. It was sufficient to add https:// at the beginning:
  www.unep.org/news-and-stories/story/pipeline-blasts-released-record-shattering-amount-methane-unep-study -> https://www.unep.org/news-and-stories/story/pipeline-blasts-released-record-shattering-amount-methane-unep-study

[paolocristofanelli]

Hi @micguerr-bopen ! many thanks for the checks!I will submit the notebook now.

[paolocristofanelli]

Here a revision of the notebook after the WP leader feedbacks. I added the Figure numbering and added references as well as sentences in in the "Assessment statement" and in the "If you want to know more'" section.

satellite_satellite-methane_extremes-detection_q02_v2.zip

[micguerr-bopen]

Hi, here's the new permalink: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/9a3b30688cf606495657e75f89a031c34e89a4d4/Satellite_ECVs/Atmospheric_Composition/satellite_satellite-methane_extremes-detection_q02.ipynb

Here's the PREVIEW

[paolocristofanelli]

Thank you. Only a question about the numbering in the title. In the preview there is a double numbering (see snapshot) due to the fact that I added "1.2.4" before the Title (request by WP leader). Does it will be fixed after approval and publication or we should remove "1.2.4" from the title?

[malmans2]

Hi @paolocristofanelli,

Who is the WP leader? You should not add numbering, as it’s automatic.
We can easily fix it and issue a new permalink, but before that, I want to make sure all WP leaders are up to speed.

[paolocristofanelli]

The WP leader is Federico. He asked me to number Figures as Fig. 1.2.4.1 etc etc. Thus I needed to add the numbering to accomodate his request. Actually in the JN template there is no figure numbering: I will remove also it .

[malmans2]

OK, I will get in touch with Federico.

Yes, please send us a new notebook without hardcoded numbering, as everything is automated when we build the book/preview. It works like LaTeX. The numbering is dynamic and depends on the total number of notebooks in the book.

[paolocristofanelli]

Thanks @malmans2 and @micguerr-bopen. Here the revised notebook.

satellite_satellite-methane_extremes-detection_q02_v2.zip

[micguerr-bopen]

Hi @paolocristofanelli,

here's the new permalink: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/3a266599cccb28b206906a2f41b1cec689a6c54d/Satellite_ECVs/Atmospheric_Composition/satellite_satellite-methane_extremes-detection_q02.ipynb

Here's the PREVIEW

[paolocristofanelli]

Hallo. Here the revised notebook after the comments by the C3S_DATA_STREAM_MANAGER. Can you provide the updated permalink?

satellite_satellite-methane_extremes-detection_q02_20250423.zip

Thanks

[nicolamasotti]

HI @paolocristofanelli,

here is the new permalink: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/f64d5828953124d7c2454532b6067bd6e75387a3/Satellite_ECVs/Atmospheric_Composition/satellite_satellite-methane_extremes-detection_q02.ipynb

PREVIEW