Satellite Soil Moisture Data for Extreme Event Analysis

[camila-trigoso]

Data Type

Satellite ECVs - Land Hydrology

Assessment Category

extremes-detection

Dataset Name

satellite-soil-moisture

Question Number

2

Workflow ID

eqctier3-bd53a29c-3585-4830-bfdf-077c4a49b1b1

Zipped Notebook

soil_moisture_2nd_Tier3.zip

Environment

name: wp5
channels:
  - conda-forge
dependencies:
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  - python-dotenv=1.0.1=pyhd8ed1ab_0
  - python-fastjsonschema=2.20.0=pyhd8ed1ab_0
  - python-json-logger=2.0.7=pyhd8ed1ab_0
  - python-tzdata=2024.2=pyhd8ed1ab_0
  - python_abi=3.11=5_cp311
  - pytz=2024.1=pyhd8ed1ab_0
  - pyyaml=6.0.2=py311h9ecbd09_1
  - pyzmq=26.2.0=py311h7deb3e3_2
  - qhull=2020.2=h434a139_5
  - qt6-main=6.7.2=hadfd74e_5
  - rasterio=1.3.11=py311hce1b398_2
  - re2=2023.09.01=h7f4b329_2
  - readline=8.2=h8228510_1
  - referencing=0.35.1=pyhd8ed1ab_0
  - regionmask=0.12.1=pyhd8ed1ab_0
  - requests=2.32.3=pyhd8ed1ab_0
  - rfc3339-validator=0.1.4=pyhd8ed1ab_0
  - rfc3986-validator=0.1.1=pyh9f0ad1d_0
  - rich=13.8.1=pyhd8ed1ab_0
  - rioxarray=0.17.0=pyhd8ed1ab_0
  - rpds-py=0.20.0=py311h9e33e62_1
  - s2n=1.5.3=h7b32b05_0
  - scikit-learn=1.5.2=py311h57cc02b_1
  - scipy=1.14.1=py311he1f765f_0
  - seaborn=0.13.2=hd8ed1ab_2
  - seaborn-base=0.13.2=pyhd8ed1ab_2
  - send2trash=1.8.3=pyh0d859eb_0
  - setuptools=75.1.0=pyhd8ed1ab_0
  - shapely=2.0.6=py311h9036bbf_1
  - shellingham=1.5.4=pyhd8ed1ab_0
  - simpervisor=1.0.0=pyhd8ed1ab_0
  - six=1.16.0=pyh6c4a22f_0
  - snappy=1.2.1=ha2e4443_0
  - sniffio=1.3.1=pyhd8ed1ab_0
  - snowballstemmer=2.2.0=pyhd8ed1ab_0
  - snuggs=1.4.7=pyhd8ed1ab_1
  - sortedcontainers=2.4.0=pyhd8ed1ab_0
  - soupsieve=2.5=pyhd8ed1ab_1
  - sparse=0.15.4=pyhd8ed1ab_0
  - spdlog=1.14.1=hed91bc2_1
  - sphinx=7.4.7=pyhd8ed1ab_0
  - sphinx-book-theme=1.1.3=pyhd8ed1ab_0
  - sphinx-comments=0.0.3=pyh9f0ad1d_0
  - sphinx-copybutton=0.5.2=pyhd8ed1ab_0
  - sphinx-design=0.6.1=pyhd8ed1ab_1
  - sphinx-external-toc=1.0.1=pyhd8ed1ab_0
  - sphinx-jupyterbook-latex=1.0.0=pyhd8ed1ab_0
  - sphinx-multitoc-numbering=0.1.3=pyhd8ed1ab_0
  - sphinx-thebe=0.3.1=pyhd8ed1ab_0
  - sphinx-togglebutton=0.3.2=pyhd8ed1ab_0
  - sphinxcontrib-applehelp=2.0.0=pyhd8ed1ab_0
  - sphinxcontrib-bibtex=2.6.3=pyhd8ed1ab_0
  - sphinxcontrib-devhelp=2.0.0=pyhd8ed1ab_0
  - sphinxcontrib-htmlhelp=2.1.0=pyhd8ed1ab_0
  - sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_0
  - sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_0
  - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_0
  - sqlalchemy=2.0.35=py311h9ecbd09_0
  - sqlite=3.46.1=h9eae976_0
  - stack_data=0.6.2=pyhd8ed1ab_0
  - statsmodels=0.14.3=py311h9f3472d_1
  - structlog=24.4.0=pyhd8ed1ab_0
  - tabulate=0.9.0=pyhd8ed1ab_1
  - tblib=3.0.0=pyhd8ed1ab_0
  - tenacity=9.0.0=pyhd8ed1ab_0
  - terminado=0.18.1=pyh0d859eb_0
  - threadpoolctl=3.5.0=pyhc1e730c_0
  - tiledb=2.26.1=h4c922dd_1
  - tinycss2=1.3.0=pyhd8ed1ab_0
  - tk=8.6.13=noxft_h4845f30_101
  - toml=0.10.2=pyhd8ed1ab_0
  - tomli=2.0.1=pyhd8ed1ab_0
  - toolz=0.12.1=pyhd8ed1ab_0
  - tornado=6.4.1=py311h9ecbd09_1
  - tqdm=4.66.5=pyhd8ed1ab_0
  - traitlets=5.14.3=pyhd8ed1ab_0
  - typer=0.12.5=pyhd8ed1ab_0
  - typer-slim=0.12.5=pyhd8ed1ab_0
  - typer-slim-standard=0.12.5=hd8ed1ab_0
  - types-python-dateutil=2.9.0.20240906=pyhd8ed1ab_0
  - typing-extensions=4.12.2=hd8ed1ab_0
  - typing_extensions=4.12.2=pyha770c72_0
  - typing_utils=0.1.0=pyhd8ed1ab_0
  - tzcode=2024b=hb9d3cd8_0
  - tzdata=2024a=h8827d51_1
  - uc-micro-py=1.0.3=pyhd8ed1ab_0
  - udunits2=2.2.28=h40f5838_3
  - uri-template=1.3.0=pyhd8ed1ab_0
  - uriparser=0.9.8=hac33072_0
  - urllib3=2.2.3=pyhd8ed1ab_0
  - wayland=1.23.1=h3e06ad9_0
  - wcwidth=0.2.13=pyhd8ed1ab_0
  - webcolors=24.8.0=pyhd8ed1ab_0
  - webencodings=0.5.1=pyhd8ed1ab_2
  - websocket-client=1.8.0=pyhd8ed1ab_0
  - wheel=0.44.0=pyhd8ed1ab_0
  - xarray=2024.9.0=pyhd8ed1ab_0
  - xarraymannkendall=1.4.5=pyhd8ed1ab_0
  - xcb-util=0.4.1=hb711507_2
  - xcb-util-cursor=0.1.5=hb9d3cd8_0
  - xcb-util-image=0.4.0=hb711507_2
  - xcb-util-keysyms=0.4.1=hb711507_0
  - xcb-util-renderutil=0.3.10=hb711507_0
  - xcb-util-wm=0.4.2=hb711507_0
  - xerces-c=3.2.5=h666cd97_1
  - xesmf=0.8.7=pyhd8ed1ab_0
  - xhistogram=0.3.2=pyhd8ed1ab_0
  - xkeyboard-config=2.42=h4ab18f5_0
  - xorg-fixesproto=5.0=hb9d3cd8_1003
  - xorg-inputproto=2.3.2=hb9d3cd8_1003
  - xorg-kbproto=1.0.7=hb9d3cd8_1003
  - xorg-libice=1.1.1=hd590300_0
  - xorg-libsm=1.2.4=h7391055_0
  - xorg-libx11=1.8.9=hb711507_1
  - xorg-libxau=1.0.11=hb9d3cd8_1
  - xorg-libxdmcp=1.1.3=hb9d3cd8_1
  - xorg-libxext=1.3.4=h0b41bf4_2
  - xorg-libxfixes=5.0.3=h7f98852_1004
  - xorg-libxi=1.7.10=h4bc722e_1
  - xorg-libxrender=0.9.11=hd590300_0
  - xorg-libxtst=1.2.5=h4bc722e_0
  - xorg-libxxf86vm=1.1.5=hb9d3cd8_2
  - xorg-recordproto=1.14.2=hb9d3cd8_1003
  - xorg-renderproto=0.11.1=hb9d3cd8_1003
  - xorg-xextproto=7.3.0=hb9d3cd8_1004
  - xorg-xproto=7.0.31=hb9d3cd8_1008
  - xskillscore=0.0.26=pyhd8ed1ab_0
  - xyzservices=2024.9.0=pyhd8ed1ab_0
  - xz=5.2.6=h166bdaf_0
  - yaml=0.2.5=h7f98852_2
  - yarl=1.12.1=py311h9ecbd09_0
  - zarr=2.18.3=pyhd8ed1ab_0
  - zeromq=4.3.5=ha4adb4c_5
  - zict=3.0.0=pyhd8ed1ab_0
  - zipp=3.20.2=pyhd8ed1ab_0
  - zlib=1.3.1=h4ab18f5_1
  - zstandard=0.23.0=py311hbc35293_1
  - zstd=1.5.6=ha6fb4c9_0
  - pip:
      - alembic==1.13.3
      - c3s-eqc-automatic-quality-control==0.1.2.dev113+g12de045
      - cacholote==1.4.0
      - cgul==0.0.4
      - earthkit-geo==0.2.0
      - earthkit-meteo==0.1.1
      - eccodes==2.38.0
      - ecmwflibs==0.6.3
      - kaleido==0.2.1
      - mako==1.3.5
      - pymannkendall==1.4.3
      - sqlalchemy-utils==0.41.2
prefix: /data/common/miniforge3/envs/wp5

Note: you may need to restart the kernel to use updated packages.

Anything else we need to know?

I made a mistake and also postes in the c3s-eqc-toolbox-template, I already closed the issue.

[malmans2]

Hi @camila-trigoso,

You need to fix a couple of issues:

• For bibliography references, you must use valid URLs. So you have to substitute doi:10.2760/928418 with https://dx.doi.org/10.2760/928418
• You can not jump from heading level 3 to heading level 5. So either use #### Figure ... instead of ##### Figure ..., or use bold instead. E.g. **Figure ...**

[camila-trigoso]

Hi @malmans2 ,

Thank you for the correction. Here it goes:
soil_moisture_2nd_Tier3 (1).zip

[malmans2]

Permalink: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/99477376491f03b4802165d47df8d85ceffd3b79/Satellite_ECVs/Land_Hydrology/satellite_satellite-soil-moisture_extremes-detection_q02.ipynb

Please ensure that the notebook name is correct. If you need to make any modifications (e.g., addressing the reviewer's comments), please share the new version of the notebook here, and I will provide a new permalink. Let me know once the notebook is accepted, and I will merge the PR into the main branch.

PREVIEW