Update workflows to use python 3.12 and ubuntu 22.04 [all tests ci] (OSOceanAcoustics#1466)

* update to use python 3.12 and ubuntu 22.04

* update v0.10.0 release notes

Author: leewujung

.ci_helpers/user_environment.yml

@@ -2,7 +2,7 @@ name: echopype
 channels:
   - conda-forge
 dependencies:
-  - python=3.11
+  - python=3.12
   - ipykernel
   - echopype
   - dask

.github/workflows/docker.yaml

@@ -12,7 +12,7 @@ env:
 jobs:
   docker-build:
     name: ${{ matrix.image_name }}-build
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-22.04
     strategy:
       matrix:
         image_name: ["minioci", "http"]

.github/workflows/packit.yaml

@@ -10,7 +10,7 @@ on:
 jobs:
   build-artifact:
     name: Build echopype package
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-22.04
     if: github.repository == 'OSOceanAcoustics/echopype'
     steps:
     - name: Checkout
@@ -22,7 +22,7 @@ jobs:
     - name: Set up Python
       uses: actions/[email protected]
       with:
-        python-version: 3.11
+        python-version: 3.12
 
     - name: Install dependencies
       run: python -m pip install setuptools wheel
@@ -50,12 +50,12 @@ jobs:
   test-built-dist:
     name: Test echopype package
     needs: build-artifact
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-22.04
     steps:
     - uses: actions/[email protected]
       name: Install Python
       with:
-        python-version: 3.11
+        python-version: 3.12
     - uses: actions/download-artifact@v4
       with:
         name: releases

.github/workflows/pr.yaml

@@ -50,7 +50,7 @@ jobs:
       # We only want to install this on one run, because otherwise we'll have
       # duplicate annotations.
       - name: Install error reporter
-        if: ${{ matrix.python-version == '3.11' }}
+        if: ${{ matrix.python-version == '3.12' }}
         run: python -m pip install pytest-github-actions-annotate-failures
       - name: Install echopype
         run: python -m pip install -e ".[plot]"

.github/workflows/pypi.yaml

@@ -14,7 +14,7 @@ on:
 jobs:
   build-artifact:
     name: Build echopype package
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-22.04
     if: github.repository == 'OSOceanAcoustics/echopype' || github.event_name == 'workflow_dispatch'
     steps:
     - name: Checkout
@@ -26,7 +26,7 @@ jobs:
     - name: Set up Python
       uses: actions/[email protected]
       with:
-        python-version: 3.11
+        python-version: 3.12
 
     - name: Install dependencies
       run: python -m pip install setuptools wheel
@@ -54,12 +54,12 @@ jobs:
   test-built-dist:
     name: Test echopype package
     needs: build-artifact
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-22.04
     steps:
     - uses: actions/[email protected]
       name: Install Python
       with:
-        python-version: 3.11
+        python-version: 3.12
     - uses: actions/download-artifact@v4
       with:
         name: releases

.readthedocs.yml

@@ -9,7 +9,7 @@ version: 2
 build:
   os: ubuntu-22.04
   tools:
-    python: "3.11"
+    python: "3.12"
   jobs:
     pre_build:
       # Generate the Sphinx configuration for this Jupyter Book so it builds.

docs/source/whats-new.md

@@ -30,7 +30,7 @@ This release includes the critical migration to use the new `xr.DataTree` functi
 * Fill in NaN for missing EK80 coefficients by @leewujung in https://github.com/OSOceanAcoustics/echopype/pull/1458
 
 ## Infrastructure
-* Update workflows python version by @leewujung in https://github.com/OSOceanAcoustics/echopype/pull/1425
+* Update workflows to use python 3.12 and ubuntu 22.04 by @leewujung in https://github.com/OSOceanAcoustics/echopype/pull/1425 and https://github.com/OSOceanAcoustics/echopype/pull/1466
 * Bump codespell version, add exceptions by @leewujung in https://github.com/OSOceanAcoustics/echopype/pull/1438
 * Pin `zarr` and `netcdf4` temporarily by @leewujung in https://github.com/OSOceanAcoustics/echopype/pull/1429
 * Add `type-extensions` to requirements.txt by @leewujung in https://github.com/OSOceanAcoustics/echopype/pull/1440