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XEC+Orf1a:A599T+S:A262S(50 seqs, >10 places, 25 with S:V1264L) #2927

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xz-keg opened this issue Mar 31, 2025 · 2 comments
Open

XEC+Orf1a:A599T+S:A262S(50 seqs, >10 places, 25 with S:V1264L) #2927

xz-keg opened this issue Mar 31, 2025 · 2 comments

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@xz-keg
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xz-keg commented Mar 31, 2025

From branch 21 of sars-cov-2-variants/lineage-proposals#2088
XEC+G2060A(Orf1a:A599T)+G22346T(S:A262S)

Query:G2060A,G22346T,C25006T,-18032, -8258,-C6312T,-G677A
Query for S:V1264L sub-branch: G25352T,G2060A,G22346T,C25006T
No. of seqs: 42(Canada 6(AB,BC,ON,SK) Denmark 1 UK 1 Germany 1 Italy 1 Luxembourg 2 Spain 1 Sweden 1 USA 28(AZ,CA,CO,CT,MI,NC,NM,NY,OH,UT,VT))

First: EPI_ISL_19378387, Italy, 2024-8-2
Latest: EPI_ISL_19802157, USA-CA, 2025-3-5

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@xz-keg xz-keg mentioned this issue Mar 31, 2025
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@FedeGueli
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Thx for this and all the updates!

@FedeGueli
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+1 CA with S:H339Y

@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A262S(42 seqs, >10 places, 21 with S:V1264L) XEC+Orf1a:A599T+S:A262S(43 seqs, >10 places, 22 with S:V1264L) Apr 8, 2025
@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A262S(43 seqs, >10 places, 22 with S:V1264L) XEC+Orf1a:A599T+S:A262S(44 seqs, >10 places, 22 with S:V1264L) Apr 20, 2025
@xz-keg xz-keg mentioned this issue Apr 20, 2025
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@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A262S(44 seqs, >10 places, 22 with S:V1264L) XEC+Orf1a:A599T+S:A262S(47 seqs, >10 places, 24 with S:V1264L) Apr 26, 2025
@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A262S(47 seqs, >10 places, 24 with S:V1264L) XEC+Orf1a:A599T+S:A262S(49 seqs, >10 places, 24 with S:V1264L) May 2, 2025
@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A262S(49 seqs, >10 places, 24 with S:V1264L) XEC+Orf1a:A599T+S:A262S(50 seqs, >10 places, 25 with S:V1264L) May 14, 2025
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