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LP.8.1 + S:A688V (12 seqs, 4 countries) #2911

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cvejris opened this issue Mar 13, 2025 · 3 comments
Open

LP.8.1 + S:A688V (12 seqs, 4 countries) #2911

cvejris opened this issue Mar 13, 2025 · 3 comments

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@cvejris
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cvejris commented Mar 13, 2025

From sars-cov-2-variants/lineage-proposals#2199
Description: LP.8.1 >> C13115T > S:A688V (C23625T)
First detected: January 3th 2025, South Africa
Countries: 9x South Africa (1x via GBW), 1x Singapore, 1x Portugal (via GBW), 1x USA (NY)
Query: C13115T,C23625T,G1954A
Tree: https://nextstrain.org/fetch/genome.ucsc.edu/trash/hgPhyloPlace/singleSubtreeAuspice_genome_1da405_3273d0.json?c=gt-S_688&gmax=25384&gmin=21563&label=id:node_7424875&showBranchLabels=all

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Note: the parent lineage (LP.8.1 + C13115T, dominant in South Africa) should be designated concomitantly
@FedeGueli
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13

@FedeGueli FedeGueli mentioned this issue Mar 19, 2025
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@FedeGueli
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14 now for 688V while the C13115T branch, now dominant in South Africa is up to 67 : @corneliusroemer i suggest to designate it as was done for LP.8.1.4

@FedeGueli
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19 with two from Portugal. This lineage is not as slow as it appears and likely has a high prevalence in Southern African countries

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@FedeGueli @cvejris