Skip to content

Lineage BR.5.1 Notes Errata #2048

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom
Closed
alurqu opened this issue Jun 10, 2023 · 1 comment
Closed

Lineage BR.5.1 Notes Errata #2048

alurqu opened this issue Jun 10, 2023 · 1 comment

Comments

@alurqu
Copy link

alurqu commented Jun 10, 2023

The commit log and lineage notes show "ORF1b:T5923I" as a defining mutation for BR.5.1. This residue position is too large. Was "ORF1ab:T5923I" intended? This would be ORF1b:T1522I.

The listed mutations BR.5 + ORF1a:K2029N, ORF1b:T5923I, A20289G cause an error on CoV-Spectrum. However, BR.5 + ORF1a:K2029N, ORF1b:T5923I, A20289G returns approximately the expected number of sequences mostly from South Korea.
@Walde1nsamkeit
Copy link
Contributor

It is actually ORF1ab:T5923I, namely ORF1b:T1522I.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@Walde1nsamkeit @alurqu