+[Bacher and Kendziorski 2016](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-0927-y), [Trapnell 2015](http://genome.cshlp.org/content/25/10/1491.full), [Tanay and Regev 2017](http://www.nature.com/nature/journal/v541/n7637/full/nature21350.html), [Moon et al. 2017](https://doi.org/10.1016/j.coisb.2017.12.008), [Tritschler et al. 2019](https://doi.org/10.1242/dev.170506), [Weiler et al. 2021](https://doi.org/10.1101/2021.12.22.473434), [Ding et al. 2022](https://doi.org/10.1038/s41576-021-00444-7), [Pan and Zhang 2023](https://pmc.ncbi.nlm.nih.gov/articles/PMC10937865/), and [Hutton and Meyer 2025](https://doi.org/10.48550/arXiv.2502.09354) provide a more comprehensive overview of single-cell RNA-seq and the pseudotime estimation problem.
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