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This repository was archived by the owner on Oct 18, 2024. It is now read-only.
command line used :
pycoQC -f seq_summary.txt -a goi.bam -o output_pycoqc.html
After executing this ommand line in the pipeline, two of all the graphs produced by pycoQC are empty:


When I checked the .command.err file, the following error was stated:

Numpy version installed == 1.26.4
Below you can find where in the pycoQC pcode `np.int' is stated:
pycoQC/pycoQC/pycoQC_plot.py
Line 1427 in 183711e
z = np.ones((len(bins), n_channels), dtype=np.int)
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