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assets/references/index.bib

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@article{Marchesi2015-pj,
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title = {The vocabulary of microbiome research: a proposal},
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author = {Marchesi, Julian R and Ravel, Jacques},
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journal = {Microbiome},
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publisher = {Springer Nature},
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volume = 3,
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number = 1,
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pages = 31,
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abstract = {The advancement of DNA/RNA, proteins, and metabolite analytical
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platforms, combined with increased computing technologies, has
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transformed the field of microbial community analysis. This
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transformation is evident by the exponential increase in the
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number of publications describing the composition and structure,
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and sometimes function, of the microbial communities inhabiting
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the human body. This rapid evolution of the field has been
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accompanied by confusion in the vocabulary used to describe
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different aspects of these communities and their environments.
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The misuse of terms such as microbiome, microbiota, metabolomic,
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and metagenome and metagenomics among others has contributed to
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misunderstanding of many study results by the scientific
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community and the general public alike. A few review articles
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have previously defined those terms, but mainly as sidebars, and
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no clear definitions or use cases have been published. In this
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editorial, we aim to propose clear definitions of each of these
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terms, which we would implore scientists in the field to adopt
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and perfect.},
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month = jul,
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year = 2015,
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url = {https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-015-0094-5},
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doi = {10.1186/s40168-015-0094-5},
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pmc = {PMC4520061},
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pmid = 26229597,
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issn = {2049-2618,2049-2618},
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language = {en}
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}

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