Update authors in other palces

Author: jfy133

CITATION.cff

@@ -14,9 +14,6 @@ authors:
   - family-names: Borry
     given-names: Maxime
     orcid: https://orcid.org/0000-0001-9140-7559
-  - family-names: Duchene
-    given-names: Sebastian
-    orcid: https://orcid.org/0000-0002-2863-0907
   - family-names: Guellil
     given-names: Meriam
     orcid: https://orcid.org/0000-0002-7235-4604
@@ -44,6 +41,12 @@ authors:
   - family-names: Oskolkov
     given-names: Nikolay
     orcid: https://orcid.org/0000-0001-5326-8893
+  - family-names: Pach
+    given-names: Aleksandra Laura
+    orcid: https://orcid.org/0009-0009-0940-9500
+  - family-names: Pérez
+    given-names: Vilma
+    orcid: https://orcid.org/0000-0001-7996-2189
   - family-names: Schmid
     given-names: Clemens
     orcid: https://orcid.org/0000-0003-3448-5715
@@ -52,10 +55,17 @@ authors:
     orcid: https://orcid.org/0000-0001-9810-9917
   - family-names: Warner
     given-names: Robin
+  - family-names: Zampirolo
+    given-names: Giulia
+    orcid: https://orcid.org/0009-0001-0145-1538
+  - family-names: Zeibig
+    given-names: Teresa
+    orcid: https://orcid.org/0009-0000-2068-3505
+
 title: "Introduction to Ancient Metagenomics"
-version: 2023.1
+version: 2024
 doi: 10.5281/zenodo.8027280
-date-released: 2023-10-07
+date-released: 2024-09-13
 license: CC-BY-4.0
 keywords:
   - "ancient metagenomics"
@@ -68,4 +78,4 @@ keywords:
   - microbiome
   - pathogen
 repository-code: "https://github.com/SPAAM-community/intro-to-ancient-metagenomics-book"
-url: "spaam-community.org/intro-to-ancient-metagenomics-book/"
+url: "https://spaam-community.org/intro-to-ancient-metagenomics-book/"

README.md

@@ -70,10 +70,19 @@ General tips:
 
 ## Release procedure
 
+### Before
+
 - Make sure authors updated
+  - On authors.qmd
+  - In citations.gff
+  - In citing-this-book.qmd (set DOI to root DOI)
 - Make sure cover images updated (Edition 202X)
 - Make sure all data files uploaded, and if necessary Zenodo DOI updated
 
+### After
+
+- In citing-this-book.qmd (set DOI to release DOI)
+
 ## Notes
 
 [^1]: I recommend installing the [gitpod chrome extension](https://chrome.google.com/webstore/detail/gitpod-always-ready-to-co/dodmmooeoklaejobgleioelladacbeki) which adds a nice shortcut button to the github repository next to the green 'code' button.

authors.qmd

@@ -28,6 +28,6 @@ The creation of this text book was developed through a series of summer schools
 | 2024 | ![](assets/images/headshots/ZEIBIG_Tessa.jpg){width="100px" fig-align="center"} | 🇩🇪 **Tessa Zeibig** is a trained Microbiologist, she’s currently pursuing her PhD in the Computational Pathogenomics Group led by Alexander Herbig at the Max Planck Institute for Evolutionary Anthropology. Her focus is on human viruses, seeking to understand their evolution and development, using ancient genomic data. |
 | 2024 | ![](assets/images/headshots/PEREZ_Vilma.JPG){width="100px" fig-align="center"} | 🇨🇱 **Vilma Pérez** is a microbial ecologist at the Australian Centre for Ancient DNA, University of Adelaide. Her research focuses on reconstructing microbial communities from present and past environments using environmental DNA techniques. Her objective is to use this information as bioindicators, providing insights into how environments have changed or responded to disturbances over time. |
 | 2022-2023 | ![](assets/images/headshots/HISS_Alina.jpg){width="100px" fig-align="center"} | 🇩🇪 **Alina Hiss** is a PhD student in the Computational Pathogenomics group at the Max Planck Institute for Evolutionary Anthropology. She is interested in the evolution of human pathogens and working on material from the Carpathian basin to gain insights about the presence and spread of pathogens in the region during the Early Medieval period. |
-| 2023 | ![](assets/images/headshots/WARNER_Robin.jpg){width="100px" fig-align="center"} | 🇩🇪 Robin Warner is a MSc bioinformatics student at the Leipzig University. He is currently writing his master's thesis in the Max Planck Research Group for Ancient Environmental Genomics about the comparison of ancient sedimentary DNA capture methods and shotgun sequencing. |
+| 2023 | ![](assets/images/headshots/WARNER_Robin.jpg){width="100px" fig-align="center"} | 🇩🇪 **Robin Warner* is a MSc bioinformatics student at the Leipzig University. He is currently writing his master's thesis in the Max Planck Research Group for Ancient Environmental Genomics about the comparison of ancient sedimentary DNA capture methods and shotgun sequencing. |
 | 2022 | ![](assets/images/headshots/VELSKO_Irina.jpeg){width="100px" fig-align="center"} | 🇺🇸 **Irina Velsko** is a postdoc in the Microbiome group of the department of Archaeogenetics at the Max Planck Institute for Evolutionary Anthropology. She did her PhD work on oral microbiology and immunology of the living, and now works on oral microbiomes of the living and the dead. Her work focuses on the evolution and ecology of dental plaque biofilms, both modern and ancient, and the complex interplay between microbiomes and their hosts. |
 | 2022 | ![](assets/images/headshots/MICHEL_Megan.jpg){width="100px" fig-align="center"} | 🇺🇸 **Megan Michel** is a PhD student jointly affiliated with the Archaeogenetics Department at the Max Planck Institute for Evolutionary Anthropology and the Human Evolutionary Biology Department at Harvard University. Her research focuses on using computational genomic analyses to understand how pathogens have co-evolved with their hosts over the course of human history. |

citing-this-book.qmd

@@ -6,8 +6,8 @@ The source material for this book is located on GitHub:
 
 If you wish to cite this book, please use the following bibliographic information:
 
-> James A. Fellows Yates, Christina Warinner, Alina Hiß, Arthur Kocher, Clemens Schmid, Irina Velsko, Maxime Borry, Megan Michel, Nikolay Oskolkov, Sebastian Duchene, Thiseas Lamnidis, Aida Andrades Valtueña, Alexander Herbig, Alexander Hübner, Kevin Nota, Robin Warner, Meriam Guellil. (2023). Introduction to Ancient Metagenomics (Edition 2023). Zenodo. DOI: [10.5281/zenodo.8027281](https://doi.org/10.5281/zenodo.8027281)
+> James A. Fellows Yates, Christina Warinner, Aida Andrades Valtueña, Maxime Borry, Meriam Guellil, Alexander Herbig, Alina Hiß, Alexander Hübner, Arthur Kocher, Thiseas C. Lamnidis, Megan E. Michel, Kevin Nota, Nikolay Oskolkov, Aleksandra Laura Pach, Vilma Pérez, Clemens Schmid, Irina M. Velsko, Robin Warner, Giulia Zampirolo, Teresa Zeibig. (2024). Introduction to Ancient Metagenomics (Edition 2024). Zenodo. DOI: [10.5281/zenodo.8027280](https://doi.org/10.5281/zenodo.8027280)
 
-<!-- TODO Update authors after each summer school -->
+<!-- TODO Update Zenodo URL to root DOI before release, after release, switch to correct version after release -->
 
 <a rel="license" href="http://creativecommons.org/licenses/by/4.0/"><img alt="Creative Commons Licence" style="border-width:0" src="https://i.creativecommons.org/l/by/4.0/88x31.png" /></a><br />This work is licensed under a <a rel="license" href="http://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International License</a>.