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mattiarighibouweandela
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Update job script (#1757)
* Update job script for DKRZ * Remove unused script for CLUSTER * Update esmvaltool/utils/batch-jobs/job_DKRZ-MISTRAL.sh * Update esmvaltool/utils/batch-jobs/job_DKRZ-MISTRAL.sh * Update esmvaltool/utils/batch-jobs/job_DKRZ-MISTRAL.sh * Update esmvaltool/utils/batch-jobs/job_DKRZ-MISTRAL.sh * Set environment properly
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#!/bin/bash -e
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###############################################################################
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### BATCH SCRIPT TO RUN THE ESMVALTOOL AT DKRZ MISTRAL
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### Author: Mattia Righi (DLR)
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###############################################################################
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#SBATCH --partition=compute
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#SBATCH --time=08:00:00
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#SBATCH --partition=prepost
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#SBATCH --exclusive
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#SBATCH --nodes=1
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#SBATCH --mem=0
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#SBATCH --time=12:00:00
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#SBATCH --mail-type=FAIL,END
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#SBATCH --account=bd0854
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#SBATCH --account=XXXXXX
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#SBATCH --output=job_%j.out.log
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#SBATCH --error=job_%j.err.log
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###############################################################################
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# Submit job with: sbatch job_DKRZ-MISTRAL.sh
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# Input arguments
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RECIPE=recipe_perfmetrics_CMIP5.yml
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CONFIG=config-user.yml
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RECIPE= # e.g. recipe_perfmetrics_CMIP5.yml
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CONFIG= # e.g. config-user.yml
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# Set environment
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CONDAPATH= # e.g. /home/soft/miniconda3/
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CONDAENV= # e.g. $CONDAPATH/envs/esmvaltool/bin
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ESMVALPATH= # e.g. /home/ESMValTool/esmvaltool
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# Changes below this line should not be required
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export PATH=$PATH:$CONDAPATH/bin/
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source $CONDAPATH/etc/profile.d/conda.sh
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conda activate esmvaltool
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conda info --envs
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$CONDAENV/esmvaltool $ESMVALPATH/recipes/$RECIPE -c $ESMVALPATH/$CONFIG
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esmvaltool run --config-file $CONFIG $RECIPE

esmvaltool/utils/batch-jobs/job_PA2-CLUSTER.sh

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