Can't run examples

[navidcy]

Am I doing something wrong?

navid:Oceananigans.jl/ (master) $ julia --project                                                                                                [19:00:13]
               _
   _       _ _(_)_     |  Documentation: https://docs.julialang.org
  (_)     | (_) (_)    |
   _ _   _| |_  __ _   |  Type "?" for help, "]?" for Pkg help.
  | | | | | | |/ _` |  |
  | | |_| | | | (_| |  |  Version 1.1.0 (2019-01-21)
 _/ |\__'_|_|_|\__'_|  |
|__/                   |

julia> include("examples/internal_wave.jl")
ERROR: LoadError: could not open file /Users/navid/Research/Oceananigans.jl/examples/utils.jl
...

I guess the problem is the include("utils.jl") line found in all example .jl scripts. Is this supposed to be src/utils.jl?

[ali-ramadhan]

Ah woops, sorry! Embarrassing mistake on my part. I cleaned up the examples/ directory recently and accidently moved examples/utils.jl to sandbox/utils.jl.

Thanks for posting this!

Should be fixed now (#255).

[navidcy]

Now I get this...

julia> include("internal_wave.jl")
[ Info: Recompiling stale cache file /Users/navid/.julia/compiled/v1.1/Plots/ld3vC.ji for Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80]
σ / f = 1.0456506175619953
ERROR: LoadError: DimensionMismatch("array could not be broadcast to match destination")
Stacktrace:
 [1] check_broadcast_shape at ./broadcast.jl:456 [inlined]
 [2] check_broadcast_axes at ./broadcast.jl:459 [inlined]
 [3] check_broadcast_axes at ./broadcast.jl:462 [inlined]
 [4] instantiate at ./broadcast.jl:258 [inlined]
 [5] materialize!(::OffsetArrays.OffsetArray{Float64,3,Array{Float64,3}}, ::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{3},Nothing,typeof(u₀),Tuple{Array{Float64,3},Array{Float64,3},Array{Float64,3}}}) at ./broadcast.jl:756
 [6] #set_ic!#3(::Function, ::Function, ::Function, ::Function, ::Function, ::Function, ::Model{CPU,RegularCartesianGrid{Float64,StepRangeLen{Float64,Base.TwicePrecision{Float64},Base.TwicePrecision{Float64}}},Oceananigans.TurbulenceClosures.ConstantAnisotropicDiffusivity{Float64},Float64}) at /Users/navid/Research/Oceananigans.jl/examples/utils.jl:17
 [7] (::getfield(Main, Symbol("#kw##set_ic!")))(::NamedTuple{(:u, :v, :w, :T),Tuple{typeof(u₀),typeof(v₀),typeof(w₀),typeof(T₀)}}, ::typeof(set_ic!), ::Model{CPU,RegularCartesianGrid{Float64,StepRangeLen{Float64,Base.TwicePrecision{Float64},Base.TwicePrecision{Float64}}},Oceananigans.TurbulenceClosures.ConstantAnisotropicDiffusivity{Float64},Float64}) at ./none:0
 [8] top-level scope at none:0
 [9] include at ./boot.jl:326 [inlined]
 [10] include_relative(::Module, ::String) at ./loading.jl:1038
 [11] include(::Module, ::String) at ./sysimg.jl:29
 [12] include(::String) at ./client.jl:403
 [13] top-level scope at none:0
in expression starting at /Users/navid/Research/Oceananigans.jl/examples/internal_wave.jl:110

[ali-ramadhan]

Ah I think we forgot to update the example when we merged in the halo regions feature yesterday...

Should be able to fix this in a few minutes.