fix sorting hmm hits

trvinh · trvinh · commit 57859800b224 · 2023-02-14T11:14:23.000+01:00
diff --git a/fdog/libs/hmm.py b/fdog/libs/hmm.py
@@ -73,7 +73,7 @@ def sort_hmm_hits(hmm_hits, hitLimit = 10, scoreCutoff = 10, debug = False):
         key:val for key, val in score_dict.items() \
         if key >= cutoff
     }
-    for score in sorted(score_dict):
+    for score in sorted(score_dict, reverse = True):
         if n < hitLimit:
             for id in score_dict[score]:
                 hmm_cand[id] = score
diff --git a/setup.py b/setup.py
@@ -26,7 +26,7 @@
 
 setup(
     name="fdog",
-    version="0.1.7",
+    version="0.1.8",
     python_requires='>=3.7.0',
     description="Feature-aware Directed OrtholoG search tool",
     long_description=long_description,

Original file line number	Diff line number	Diff line change
`@@ -73,7 +73,7 @@ def sort_hmm_hits(hmm_hits, hitLimit = 10, scoreCutoff = 10, debug = False):`
`73`	`73`	`key:val for key, val in score_dict.items() \`
`74`	`74`	`if key >= cutoff`
`75`	`75`	`}`
`76`		`- for score in sorted(score_dict):`
	`76`	`+ for score in sorted(score_dict, reverse = True):`
`77`	`77`	`if n < hitLimit:`
`78`	`78`	`for id in score_dict[score]:`
`79`	`79`	`hmm_cand[id] = score`