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1. Transitions Transitions Public

   Accompanying code for the paper "Global patterns and rates of habitat transitions across the eukaryotic tree of life" (Jamy et al. 2022) on Nature Ecology and Evolution.

   Shell 4 3

2. Phylogenomics_Data Phylogenomics_Data Public

   Phylogenomics data and scripts

   Shell 1

3. scripts scripts Public

   Various scripts used in the Burki Lab

   Python

4. long-reads long-reads Public

   Data and scripts for "Long metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity" (Jamy et al. 2019). Duplicated from https://github.com/…

   C++

5. juppmaxyter_tunnel juppmaxyter_tunnel Public

   This small repo helps to tunnel jupyter lab from UPPMAX. Jupyter can then be used for any preferred kernel.

   Shell

6. Ammonia Ammonia Public

   Internal workshop on git, Github and Jupyter - April 2022

   Jupyter Notebook